Modifier and Type | Interface and Description |
---|---|
interface |
CellDetectionAddon
A cell detection addon is a class supporting to detect cells in microscope images.
|
interface |
CellVisualizationAddon
A cell visualization addon is a class supporting to visualize previously detected cells in microscope images by generating new images.
|
Modifier and Type | Interface and Description |
---|---|
interface |
CustomAddonCreator<C extends Configuration,T extends Component>
Interface which has to be implemented if the creation of a component, given its configuration, should be done
differently from the default mechanism.
|
Modifier and Type | Method and Description |
---|---|
Component |
ComponentAddonFactoryAdapter.createComponent(PositionInformation positionInformation,
Configuration configuration,
ConstructionContext constructionContext) |
Component |
ComponentAddonFactory.createComponent(PositionInformation positionInformation,
Configuration configuration,
ConstructionContext constructionContext)
Creates an addon for the given configuration.
|
Modifier and Type | Method and Description |
---|---|
java.lang.Class<? extends Component> |
GenericComponentMetadata.getComponentInterface() |
java.lang.Class<? extends Component> |
ComponentMetadataAdapter.getComponentInterface() |
java.lang.Class<? extends Component> |
ComponentMetadata.getComponentInterface()
Returns the interface of the measurement component created when the configuration is parsed.
|
Modifier and Type | Method and Description |
---|---|
<C extends Configuration> |
ComponentAddonFactoryAdapter.addAddon(java.lang.Class<? extends ComponentAddonUI<C>> configurationAddonClass,
java.lang.Class<? extends Component> componentClass,
ComponentMetadata<C> metadata)
Adds an addon with an own UI, but automatic component creation by appropriate constructors of the component.
|
<C extends Configuration> |
ComponentAddonFactoryAdapter.addAddon(java.lang.String typeIdentifier,
java.lang.Class<C> configurationClass,
java.lang.Class<? extends Component> componentClass)
Adds an addon with an automatically generated UI, as well as automatic component creation by appropriate constructors of the component.
|
Constructor and Description |
---|
ComponentAddonFactoryAdapter(java.lang.Class<? extends ComponentAddonUI<C>> configurationAddonClass,
java.lang.Class<? extends Component> componentClass,
ComponentMetadata<C> metadata)
Constructor.
|
ComponentAddonFactoryAdapter(java.lang.String typeIdentifier,
java.lang.Class<C> configurationClass,
java.lang.Class<? extends Component> componentClass)
Constructor.
|
ComponentMetadataAdapter(java.lang.String typeIdentifier,
java.lang.Class<C> configurationClass,
java.lang.Class<? extends Component> componentInterface,
java.lang.String typeName)
Constructor.
|
ComponentMetadataAdapter(java.lang.String typeIdentifier,
java.lang.Class<C> configurationClass,
java.lang.Class<? extends Component> componentInterface,
java.lang.String typeName,
java.lang.String iconPath)
Constructor.
|
ComponentMetadataAdapter(java.lang.String typeIdentifier,
java.lang.Class<C> configurationClass,
java.lang.Class<? extends Component> componentInterface,
java.lang.String typeName,
java.lang.String[] configurationClassification)
Constructor.
|
ComponentMetadataAdapter(java.lang.String typeIdentifier,
java.lang.Class<C> configurationClass,
java.lang.Class<? extends Component> componentInterface,
java.lang.String typeName,
java.lang.String[] configurationClassification,
java.lang.String iconPath)
Constructor.
|
GenericComponentAddonUI(java.lang.String typeIdentifier,
java.lang.Class<C> configurationClass,
java.lang.Class<? extends Component> componentInterface,
YouScopeClient client,
YouScopeServer server)
Constructor.
|
GenericComponentMetadata(java.lang.String typeIdentifier,
java.lang.Class<C> configurationClass,
java.lang.Class<? extends Component> componentInterface)
Constructor.
|
Modifier and Type | Interface and Description |
---|---|
interface |
DropletControllerResource
Abstract class all controllers for droplet based microfluidics should implement.
|
interface |
DropletObserverResource
Abstract class all observers for droplet based microfluidics should implement.
|
Modifier and Type | Interface and Description |
---|---|
interface |
FocusScoreResource
A cell focus score resource is a class supporting scoring the quality of the focal plane by an image taken in the plane.
|
Modifier and Type | Interface and Description |
---|---|
interface |
FocusSearchResource
A focus search algorithm addon is a class defining an algorithm to autofocus based on a given focus score.
|
Modifier and Type | Interface and Description |
---|---|
interface |
Job
Base class of all jobs.
|
Modifier and Type | Class and Description |
---|---|
class |
EditableJobContainerAdapter
/**
Convenient adapter class to implement a job which contains other jobs.
|
class |
JobAdapter
Convenient adapter class to implement a job.
|
Modifier and Type | Interface and Description |
---|---|
interface |
ChangePositionJob
A job to change the stage's position.
|
interface |
CompositeJob
A job which consists of other jobs.
|
interface |
ContinuousImagingJob |
interface |
DeviceSettingJob |
interface |
FocusingJob |
interface |
ImagingJob
A job which makes a microscope image in the defined channel.
|
interface |
ScriptingJob
A scripting job executes a script every time it runs, and-depending on the script-its child jobs.
|
interface |
StatisticsJob
Interface of a measurement job which collects statistical data about the evaluation and appends it to a file.
|
interface |
WaitJob
A job for waiting a given time.
|
Modifier and Type | Interface and Description |
---|---|
interface |
Measurement
Represents a measurement a microscope should do.
|
Modifier and Type | Interface and Description |
---|---|
interface |
Resource
A resource is some configurable object which can be used by jobs during a measurement.
|
Modifier and Type | Class and Description |
---|---|
class |
ResourceAdapter<C extends ResourceConfiguration>
Adapter to simplify resource creation.
|
Modifier and Type | Interface and Description |
---|---|
interface |
SaveSettings
Configuration of the folder structure defining how measurement data should be saved.
|
Modifier and Type | Interface and Description |
---|---|
interface |
AutoFocusJob
Interface of a measurement job which automatically adjusts the focus.
|
Modifier and Type | Interface and Description |
---|---|
interface |
ComposedImagingJob |
interface |
PlateScanningJob |
interface |
StaggeringJob |
Modifier and Type | Interface and Description |
---|---|
interface |
ShortContinuousImagingJob |
Modifier and Type | Interface and Description |
---|---|
interface |
ControllerJob
Job which implements a controller, consisting of an input, a control algorithm and an output.
|
Modifier and Type | Interface and Description |
---|---|
interface |
CustomJob
A job consisting of other jobs, which can be configured by the user.
|
Modifier and Type | Method and Description |
---|---|
Component |
CustomJobAddonFactory.createComponent(PositionInformation positionInformation,
Configuration configuration,
ConstructionContext constructionContext) |
Modifier and Type | Interface and Description |
---|---|
interface |
DropletMicrofluidicJob
Job which implements the droplet based microfluidic controller.
|
Modifier and Type | Interface and Description |
---|---|
interface |
FluigentJob
Job to control the Fluigent syringe.
|
Modifier and Type | Interface and Description |
---|---|
interface |
CellDetectionJob
This job detects cells in the image passed to it.
|
Modifier and Type | Interface and Description |
---|---|
interface |
LiveModifiableJob
Interface of a measurement job which collects statistical data about the evaluation and appends it to a file.
|
Modifier and Type | Interface and Description |
---|---|
interface |
NemesysJob
Job to control the Nemesys syringe.
|
Modifier and Type | Interface and Description |
---|---|
interface |
OnixJob
A job to control the CellAsic Onix microfluidic system.
|
Modifier and Type | Interface and Description |
---|---|
interface |
OutOfFocusJob
A job which makes a microscope image in the defined channel with a defined focus offset.
|
Modifier and Type | Interface and Description |
---|---|
interface |
RepeatJob
A job which consists of other jobs, which gets executed several times when the repeat job is executed.
|
Modifier and Type | Interface and Description |
---|---|
interface |
SlimJob
Job to take SLIM images with four different phase shift patterns.
|
Modifier and Type | Class and Description |
---|---|
class |
StandardSaveSettings
Standard save settings, e.g.
|
Modifier and Type | Interface and Description |
---|---|
interface |
WaitForUserJob |
Modifier and Type | Method and Description |
---|---|
<T extends Component> |
ComponentProvider.createComponent(PositionInformation positionInformation,
Configuration configuration,
java.lang.Class<T> componentKind)
Creates a measurement component of a given type for the given configuration.
|
<T extends Component> |
ComponentProvider.createComponent(PositionInformation positionInformation,
java.lang.String typeIdentifier,
java.lang.Class<T> componentInterface)
Creates a component with the given type identifier and its default configuration, which additionally has a given interface.
|
Modifier and Type | Method and Description |
---|---|
Component |
ComponentProvider.createComponent(PositionInformation positionInformation,
Configuration configuration)
Creates a measurement component for the given configuration.
|
Component |
ComponentProvider.createComponent(PositionInformation positionInformation,
java.lang.String typeIdentifier)
Creates a component with the given type identifier and its default configuration
Note that not all components support default construction.
|