G-Index

A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

G

GeneralSettingsPage<T extends MeasurementConfiguration> - Class in org.youscope.addon.measurement.pages: A page with which the measurement name, save setting and runtime can be set.
GeneralSettingsPage(YouScopeClient, Class<T>) - Constructor for class org.youscope.addon.measurement.pages.GeneralSettingsPage: Constructor.
GenericComponentAddonUI<C extends Configuration> - Class in org.youscope.addon.component: User interface to configure a measurement component which is automatically created from the component's configuration class.
GenericComponentAddonUI(String, Class<C>, Class<? extends Component>, YouScopeClient, YouScopeServer) - Constructor for class org.youscope.addon.component.GenericComponentAddonUI: Constructor.
GenericComponentMetadata<C extends Configuration> - Class in org.youscope.addon.component: Helper class to construct configuration metadata.
GenericComponentMetadata(String, Class<C>, Class<? extends Component>) - Constructor for class org.youscope.addon.component.GenericComponentMetadata: Constructor.
GenericException - Exception in org.youscope.addon.component.generic: Error thrown when analyzing a configuration class with java reflection.
GenericException(String) - Constructor for exception org.youscope.addon.component.generic.GenericException: Constructor.
GenericException(String, Throwable) - Constructor for exception org.youscope.addon.component.generic.GenericException: Constructor.
get(int) - Method in class org.json.JSONArray: Get the object value associated with an index.
get(String) - Method in class org.json.JSONObject: Get the value object associated with a key.
get(int) - Method in interface org.youscope.common.table.ColumnView: Returns the entry in the given row.
get(int) - Method in interface org.youscope.common.table.RowView: Returns the entry in the given column.
get(ColumnDefinition<T>) - Method in interface org.youscope.common.table.RowView: Returns the table entry corresponding to the given column definition.
get(int, Class<T>) - Method in interface org.youscope.common.table.RowView: Returns the entry in the given column with the given value type.
get(String) - Method in interface org.youscope.common.table.RowView: Returns the entry with the given column name.
get(String, Class<T>) - Method in interface org.youscope.common.table.RowView: Returns the entry in the column with the given column name, having the given value type.
get(int) - Method in class org.youscope.common.table.TemporaryRow
get(int, Class<T>) - Method in class org.youscope.common.table.TemporaryRow
get(String) - Method in class org.youscope.common.table.TemporaryRow
get(String, Class<T>) - Method in class org.youscope.common.table.TemporaryRow
get(ColumnDefinition<T>) - Method in class org.youscope.common.table.TemporaryRow
getActiveTimeUnit() - Method in class org.youscope.uielements.PeriodField: Returns the currently selected time unit.
getAddonDescription() - Method in interface org.youscope.addon.serveraddon.ServerAddon: Should return a human readable description of the general purpose of the interface, about the provided functionality, specific properties of the implementation, as well as about the person/company which designed the addon and how where it can be obtained (e.g.
getAddonDescription() - Method in class org.youscope.plugin.openbis.OpenBISAddonImpl
getAddonID() - Method in interface org.youscope.addon.serveraddon.ServerAddon: Should return a unique ID of the specific implementation of this interface.
getAddonID() - Method in class org.youscope.plugin.openbis.OpenBISAddonImpl
getAddonMetadata() - Method in interface org.youscope.addon.AddonUI: Returns the metadata (like human readable name) for the addon.
getAddonMetadata() - Method in class org.youscope.addon.AddonUIAdapter
getAddonMetadata() - Method in interface org.youscope.addon.component.ComponentAddonUI
getAddonName() - Method in interface org.youscope.addon.serveraddon.ServerAddon: Should return a short, human readable name for the addon.
getAddonName() - Method in class org.youscope.plugin.openbis.OpenBISAddonImpl
getAddonProvider() - Method in interface org.youscope.clientinterfaces.YouScopeClient: Returns a class with which client addons can be constructed.
getAddonVersion() - Method in interface org.youscope.addon.serveraddon.ServerAddon: Should return the version of the addon.
getAddonVersion() - Method in class org.youscope.plugin.openbis.OpenBISAddonImpl
getAdjustmentTime() - Method in class org.youscope.common.configuration.FocusConfiguration
getAdjustmentTime() - Method in class org.youscope.uielements.FocusField: Returns the currently selected focus adjustment time in ms.
getAllowedPropertyValues() - Method in interface org.youscope.addon.microscopeaccess.PreInitDevicePropertyInternal: Returns a list of all allowed property values.
getAllowedPropertyValues() - Method in interface org.youscope.addon.microscopeaccess.SelectablePropertyInternal: Returns a list of all allowed property values.
getAllowedPropertyValues() - Method in interface org.youscope.common.microscope.PreInitDeviceProperty: Returns a list of all allowed property values.
getAllowedPropertyValues() - Method in interface org.youscope.common.microscope.SelectableProperty: Returns a list of all allowed property values.
getApplicationName() - Method in class org.youscope.common.YouScopeVersion: Returns the name of the (sub-) application/library which is versioned.
getAttenuationFactor() - Method in class org.youscope.plugin.slimjob.SlimProperties: Returns the last identified attenuation factor, or 1 if yet not identified.
getAutofocusConfiguration() - Method in class org.youscope.plugin.dropletmicrofluidics.DropletMicrofluidicJobConfiguration: Returns the configuration for the autofocus.
getAutoFocusDevice() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns the current default auto-focus device.
getAutoFocusDevice(String) - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns the auto-focus device with the given name.
getAutoFocusDevice() - Method in interface org.youscope.common.microscope.Microscope: Returns the current default auto-focus device.
getAutoFocusDevice(String) - Method in interface org.youscope.common.microscope.Microscope: Returns the auto-focus device with the given name.
getAutoFocusDevices() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns a list of all installed auto-focus devices.
getAutoFocusDevices() - Method in interface org.youscope.common.microscope.Microscope: Returns a list of all installed auto-focus devices.
getAvailableDeviceDriver(String, String) - Method in interface org.youscope.addon.microscopeaccess.DeviceLoaderInternal: Returns the device driver with the given library and driver ID, or null, if driver could not be found.
getAvailableDeviceDrivers() - Method in interface org.youscope.addon.microscopeaccess.DeviceLoaderInternal: Returns a list of all available device drivers.
getAvailableDeviceDrivers() - Method in interface org.youscope.common.microscope.DeviceLoader: Returns a list of all available device drivers.
getBands() - Method in class org.youscope.common.image.ImageEvent: Returns the number of bands (colors in image).
getBaseFolder() - Method in class org.youscope.plugin.standardsavesettings.StandardSaveSettingsConfiguration: Returns the folder where all measurements should be saved.
getBitDepth() - Method in class org.youscope.common.image.ImageEvent: Returns the bit dept.
getBlockCommentEndDelimiter() - Method in class org.youscope.common.scripting.JavaScriptStyle
getBlockCommentEndDelimiter() - Method in class org.youscope.common.scripting.MatlabScriptStyle
getBlockCommentEndDelimiter() - Method in interface org.youscope.common.scripting.ScriptStyle: Returns the character sequence used in the language to end a block comment.
getBlockCommentEndDelimiter() - Method in class org.youscope.plugin.onix.OnixScriptStyle
getBlockCommentStartDelimiter() - Method in class org.youscope.common.scripting.JavaScriptStyle
getBlockCommentStartDelimiter() - Method in class org.youscope.common.scripting.MatlabScriptStyle
getBlockCommentStartDelimiter() - Method in interface org.youscope.common.scripting.ScriptStyle: Returns the character sequence used in the language to start a block comment.
getBlockCommentStartDelimiter() - Method in class org.youscope.plugin.onix.OnixScriptStyle
getBoolean(int) - Method in class org.json.JSONArray: Get the boolean value associated with an index.
getBoolean(String) - Method in class org.json.JSONObject: Get the boolean value associated with a key.
getBottomContstraint() - Static method in class org.youscope.uielements.StandardFormats: Returns a constraint which can be e.g.
getBreakTime() - Method in class org.youscope.common.task.VaryingPeriodConfiguration: Returns the additional time which should be waited after iterating through all periods.
getBrightFieldOpacity() - Method in class org.youscope.plugin.multicolorstream.MultiStreamPanel
getBytesPerPixel() - Method in class org.youscope.common.image.ImageEvent: Returns the number of bytes used to store each pixel.
getCallbackProvider() - Method in interface org.youscope.serverinterfaces.ConstructionContext: Returns a provider with which callbacks to the client can be obtained.
getCamera() - Method in class org.youscope.common.image.ImageEvent: Returns the name of the camera which took the image.
getCamera() - Method in interface org.youscope.common.job.basicjobs.ContinuousImagingJob: Returns the name of the camera with which it is imaged.
getCamera() - Method in interface org.youscope.common.job.basicjobs.ImagingJob: Returns the camera with which it is imaged, or null if the default camera is used.
getCamera() - Method in class org.youscope.plugin.continousimaging.ContinuousImagingJobConfiguration: Returns the camera with which should be imaged, or null, if imaging with the default camera.
getCamera() - Method in interface org.youscope.plugin.continousimaging.ShortContinuousImagingJob: Returns the name of the camera with which it is imaged.
getCamera() - Method in class org.youscope.plugin.continousimaging.ShortContinuousImagingJobConfiguration: Returns the camera with which should be imaged, or null, if imaging with the default camera.
getCamera() - Method in class org.youscope.plugin.imagingjob.ImagingJobConfiguration: Returns the ID of the camera with which should be imaged, or null, if imaging with the default camera.
getCamera() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration: Returns the ID of the camera with which should be imaged, or null, if imaging with the default camera.
getCamera() - Method in class org.youscope.uielements.LiveStreamPanel.ChannelControl: Returns the currently selected camera.
getCameraConfiguration() - Method in class org.youscope.plugin.imagingjob.ImagingJobConfiguration: Returns the camera configuration,.
getCameraConfiguration() - Method in class org.youscope.uielements.CameraField: Returns the currently selected camera configuration.
getCameraDevice() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns the current default camera device.
getCameraDevice(String) - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns the camera device with the given name.
getCameraDevice() - Method in class org.youscope.common.configuration.CameraConfiguration: Returns the name of the camera device, or null for the default camera.
getCameraDevice() - Method in interface org.youscope.common.microscope.Microscope: Returns the current default camera device.
getCameraDevice(String) - Method in interface org.youscope.common.microscope.Microscope: Returns the camera device with the given name.
getCameraDevice() - Method in class org.youscope.plugin.composedimaging.ComposedImagingJobConfiguration: Returns the camera device used for imaging.
getCameraDevice() - Method in class org.youscope.plugin.composedimaging.ComposedImagingMeasurementConfiguration: Returns the camera device used for imaging.
getCameraDevice() - Method in class org.youscope.uielements.CameraField: Returns the currently selected camera device, or null if no camera can be selected since there are no camera.
getCameraDevices() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns all currently installed camera devices.
getCameraDevices() - Method in interface org.youscope.common.microscope.Microscope: Returns all currently installed camera devices.
getCameras() - Method in interface org.youscope.common.job.basicjobs.ContinuousImagingJob: Gets the cameras.
getCameras() - Method in interface org.youscope.common.job.basicjobs.ImagingJob: Returns the names/IDs of the cameras.
getCameras() - Method in interface org.youscope.plugin.composedimaging.ComposedImagingJob: Gets the cameras.
getCameras() - Method in interface org.youscope.plugin.continousimaging.ShortContinuousImagingJob: Gets the cameras.
getCameras() - Method in class org.youscope.plugin.multicameracontinuousimaging.MultiCameraContinousImagingConfiguration
getCameras() - Method in class org.youscope.plugin.multicamerajob.ParallelImagingJobConfiguration
getCause() - Method in exception org.json.JSONException
getCDString() - Method in class org.youscope.addon.celldetection.utils.MatlabFunctionCreator: Returns the command for Matlab to switch its current directory to the temporary directory.
getCellRenderer(int, int) - Method in class org.youscope.uielements.CellSelectionTable.CellSelectionTableTable
getCellTable() - Method in class org.youscope.addon.celldetection.CellDetectionResult: Returns the cell detection table which contain information about the detected cells, e.g.
getCellTableSaveName() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionJobConfiguration: Returns the name under which the cell table should be saved (without extension).
getCellVisualizationAddonIDs() - Method in interface org.youscope.addon.celldetection.CellVisualizationAddonFactory: Returns a list of all Cell Visualization Addon IDs types supported by this factory.
getChangeHandler() - Method in class org.youscope.client.uielements.plaf.BasicQuickLoggerUI
getChannel() - Method in class org.youscope.common.configuration.ChannelConfiguration: The channel name.
getChannel() - Method in class org.youscope.common.image.ImageEvent: Returns the channel in which the image was made.
getChannel() - Method in interface org.youscope.common.job.basicjobs.ContinuousImagingJob: Gets the channel.
getChannel() - Method in interface org.youscope.common.job.basicjobs.ImagingJob: Gets the channel.
getChannel(String, String) - Method in interface org.youscope.common.microscope.ChannelManager: Returns the channel with the given ID and channel group ID.
getChannel() - Method in interface org.youscope.plugin.autofocus.AutoFocusJob: Gets the channel.
getChannel() - Method in class org.youscope.plugin.autofocus.AutoFocusJobConfiguration
getChannel() - Method in interface org.youscope.plugin.composedimaging.ComposedImagingJob: Gets the channel.
getChannel() - Method in class org.youscope.plugin.composedimaging.ComposedImagingJobConfiguration
getChannel() - Method in class org.youscope.plugin.composedimaging.ComposedImagingMeasurementConfiguration: Returns the channel in which is imaged.
getChannel() - Method in class org.youscope.plugin.continousimaging.ContinousImagingMeasurementConfiguration: The channel where the images should be made.
getChannel() - Method in class org.youscope.plugin.continousimaging.ContinuousImagingJobConfiguration: The channel where the images should be made.
getChannel() - Method in interface org.youscope.plugin.continousimaging.ShortContinuousImagingJob: Gets the channel.
getChannel() - Method in class org.youscope.plugin.continousimaging.ShortContinuousImagingJobConfiguration: The channel where the images should be made.
getChannel() - Method in class org.youscope.plugin.imagingjob.ImagingJobConfiguration: Returns the channel in which should be imaged.
getChannel() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionMeasurementConfiguration: The channel where the images should be made.
getChannel() - Method in class org.youscope.plugin.multicameracontinuousimaging.MultiCameraContinousImagingConfiguration: The channel where the images should be made.
getChannel() - Method in class org.youscope.plugin.multicamerajob.ParallelImagingJobConfiguration: Returns the channel in which should be imaged.
getChannel() - Method in interface org.youscope.plugin.outoffocus.OutOfFocusJob: Gets the channel.
getChannel() - Method in class org.youscope.plugin.outoffocus.OutOfFocusJobConfiguration
getChannel() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration
getChannel() - Method in class org.youscope.uielements.ChannelField: Returns the currently selected channel, or null if no channel can be selected since there are no channels.
getChannel() - Method in class org.youscope.uielements.LiveStreamPanel.ChannelControl: Returns the currently selected channel.
getChannelConfiguration() - Method in class org.youscope.plugin.imagingjob.ImagingJobConfiguration: Returns the channel configuration.
getChannelConfiguration() - Method in class org.youscope.uielements.ChannelField: Returns the currently selected channel configuration.
getChannelGroup() - Method in class org.youscope.common.configuration.ChannelConfiguration: The channel group name.
getChannelGroup() - Method in class org.youscope.common.image.ImageEvent: Returns the channel group in which the image was made.
getChannelGroup() - Method in interface org.youscope.common.job.basicjobs.ContinuousImagingJob: Gets the channel group.
getChannelGroup() - Method in interface org.youscope.common.job.basicjobs.ImagingJob: Gets the channel group.
getChannelGroup() - Method in interface org.youscope.plugin.autofocus.AutoFocusJob: Gets the channel group.
getChannelGroup() - Method in class org.youscope.plugin.autofocus.AutoFocusJobConfiguration
getChannelGroup() - Method in interface org.youscope.plugin.composedimaging.ComposedImagingJob: Gets the channel group.
getChannelGroup() - Method in class org.youscope.plugin.composedimaging.ComposedImagingJobConfiguration
getChannelGroup() - Method in class org.youscope.plugin.composedimaging.ComposedImagingMeasurementConfiguration
getChannelGroup() - Method in class org.youscope.plugin.continousimaging.ContinousImagingMeasurementConfiguration
getChannelGroup() - Method in interface org.youscope.plugin.continousimaging.ShortContinuousImagingJob: Gets the channel group.
getChannelGroup() - Method in class org.youscope.plugin.imagingjob.ImagingJobConfiguration
getChannelGroup() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionMeasurementConfiguration
getChannelGroup() - Method in class org.youscope.plugin.multicameracontinuousimaging.MultiCameraContinousImagingConfiguration
getChannelGroup() - Method in class org.youscope.plugin.multicamerajob.ParallelImagingJobConfiguration
getChannelGroup() - Method in interface org.youscope.plugin.outoffocus.OutOfFocusJob: Gets the channel group.
getChannelGroup() - Method in class org.youscope.plugin.outoffocus.OutOfFocusJobConfiguration
getChannelGroup() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration
getChannelGroup() - Method in class org.youscope.uielements.ChannelField: Returns the currently selected channel group, or null if no channel group can be selected since there are no channels.
getChannelGroup() - Method in class org.youscope.uielements.LiveStreamPanel.ChannelControl: Returns the currently selected channel group.
getChannelGroupID() - Method in interface org.youscope.addon.microscopeaccess.ChannelInternal: Returns the ID of the channel group where this channel belongs to.
getChannelGroupID() - Method in interface org.youscope.common.microscope.Channel: Returns the ID of the channel group where this channel belongs to.
getChannelGroupIDs() - Method in interface org.youscope.common.microscope.ChannelManager: Returns a list of all available config groups (e.g.
getChannelID() - Method in interface org.youscope.addon.microscopeaccess.ChannelInternal: Returns the ID of this channel.
getChannelID() - Method in interface org.youscope.common.microscope.Channel: Returns the ID of this channel.
getChannelManager() - Method in interface org.youscope.common.microscope.Microscope: Returns an interface with which the current channel settings can be queried and a different channel can be set.
getChannelOffSettings() - Method in interface org.youscope.common.microscope.Channel: Returns all device settings which get set if this channel is deactivated.
getChannelOnSettings() - Method in interface org.youscope.common.microscope.Channel: Returns all device settings which get set if this channel is activated.
getChannels(String) - Method in interface org.youscope.common.microscope.ChannelManager: Returns all channels in the given channel group.
getChannels() - Method in interface org.youscope.common.microscope.ChannelManager: Returns all channels.
getChannelTimeout() - Method in interface org.youscope.common.microscope.Channel: Returns the current timeout when changing a channel.
getChildJobConfigurations() - Method in interface org.youscope.plugin.livemodifiablejob.LiveModifiableJob: Returns the job configurations of the currently active child jobs.
getClassification() - Method in interface org.youscope.addon.AddonMetadata: Returns an array of strings (possibly of length 0) specifying the classification of the addon.
getClassification() - Method in class org.youscope.addon.AddonMetadataAdapter
getClassification() - Method in class org.youscope.addon.component.GenericComponentMetadata
getClient() - Method in class org.youscope.addon.AddonUIAdapter: Returns the YouScope client.
getClient() - Method in class org.youscope.addon.component.generic.PropertyEditorAdapter
getCloseButtonLabel() - Method in class org.youscope.addon.AddonUIAdapter: Returns the label of the commit button which is displayed at the bottom of a frame, when initialized as a frame.
getColumnClass(int) - Method in class org.youscope.uielements.CellSelectionTable.CellSelectionTableModel
getColumnCount() - Method in class org.youscope.uielements.CellSelectionTable.CellSelectionTableModel
getColumnDefinition() - Method in interface org.youscope.common.table.ColumnView: Returns the definition of this column.
getColumnDefinition(int) - Method in interface org.youscope.common.table.RowView: Returns the definition of the column with the given index.
getColumnDefinition(int) - Method in class org.youscope.common.table.TableDefinition: Returns the column definition at the given index.
getColumnDefinition(String) - Method in class org.youscope.common.table.TableDefinition: Returns the column definition with the given column name.
getColumnDefinition(int) - Method in class org.youscope.common.table.TemporaryRow
getColumnDefinitions() - Method in class org.youscope.common.table.TableDefinition: Returns the column definitions of this table as an array.
getColumnDescription() - Method in class org.youscope.common.table.ColumnDefinition: Returns a description of the meaning of the elements in this column.
getColumnDescription() - Method in interface org.youscope.common.table.ColumnView: Returns a description of the meaning of the elements in this column.
getColumnName() - Method in class org.youscope.common.table.ColumnDefinition: Returns the name (header) of the column.
getColumnName() - Method in interface org.youscope.common.table.ColumnView: Returns the name of the column.
getColumnName(int) - Method in interface org.youscope.common.table.RowView: Returns the name of the column with the given index.
getColumnName(int) - Method in class org.youscope.common.table.Table: Returns the name (title) of the column with the given index.
getColumnName(int) - Method in class org.youscope.common.table.TableDefinition: Returns the name of the given column.
getColumnName(int) - Method in class org.youscope.common.table.TemporaryRow
getColumnName(int) - Method in class org.youscope.uielements.CellSelectionTable.CellSelectionTableModel
getColumnName(int) - Method in interface org.youscope.uielements.CellSelectionTableConfiguration: Returns the name of the column with the given index.
getColumnNames() - Method in class org.youscope.common.table.Table: Returns the names (titles) of all columns.
getColumnNames() - Method in class org.youscope.common.table.TableDefinition: Returns the names (titles) of all columns.
getColumnView(int) - Method in class org.youscope.common.table.Table: Returns a view on the column with the given index.
getColumnView(String) - Method in class org.youscope.common.table.Table: Returns a view on the column with the given name.
getColumnView(int, Class<T>) - Method in class org.youscope.common.table.Table: Returns a view on the column with the given index, having the given value type.
getColumnView(String, Class<T>) - Method in class org.youscope.common.table.Table: Returns a view on the column with the given name, having the given value type.
getColumnView(ColumnDefinition<T>) - Method in class org.youscope.common.table.Table: Returns a view on the column which equals (only name and value type) a given, already known, column definition.
getCommunicationPingPeriod() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeConfigurationInternal: Gets the wait time used when pinging a device if a certain action is finished.
getCommunicationPingPeriod() - Method in interface org.youscope.common.microscope.MicroscopeConfiguration: Gets the wait time used when pinging a device if a certain action is finished.
getCommunicationTimeout() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeConfigurationInternal: Gets the timeout between in the communication with the devices.
getCommunicationTimeout() - Method in interface org.youscope.common.microscope.MicroscopeConfiguration: Gets the timeout between in the communication with the devices.
getComponentInterface() - Method in interface org.youscope.addon.component.ComponentMetadata: Returns the interface of the measurement component created when the configuration is parsed.
getComponentInterface() - Method in class org.youscope.addon.component.ComponentMetadataAdapter
getComponentInterface() - Method in interface org.youscope.addon.component.CustomAddonCreator: Returns the public interface of the component which gets created.
getComponentInterface() - Method in class org.youscope.addon.component.GenericComponentMetadata
getComponentMetadata(String) - Method in interface org.youscope.addon.component.ComponentAddonFactory: Returns the metadata (like human readable name) for a given configuration type.
getComponentMetadata(String) - Method in class org.youscope.addon.component.ComponentAddonFactoryAdapter
getComponentMetadata(String) - Method in interface org.youscope.addon.measurement.MeasurementAddonFactory: Returns the metadata (like human readable name) for a given measurement type.
getComponentMetadata(String) - Method in class org.youscope.addon.measurement.MeasurementAddonFactoryAdapter
getComponentMetadata(Class<T>) - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns the metadata of all components being able to produce or consume sub-class of the provided configuration class.
getComponentMetadata() - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns the metadata of all components.
getComponentMetadata(String) - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns the metadata of the component having the given type identifier
getComponentMetadata(String, Class<T>) - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns the metadata of the component having the given type identifier, with the component producing/consuming the given type of configurations.
getComponentMetadata(String) - Method in class org.youscope.plugin.customjob.CustomJobAddonFactory
getComponentProvider(CallbackProvider) - Method in class org.youscope.server.YouScopeServerImpl
getComponentProvider() - Method in interface org.youscope.serverinterfaces.ConstructionContext: Returns a provider with which measurement components, such as jobs and resources, can be created given the corresponding configurations.
getComponentProvider(CallbackProvider) - Method in interface org.youscope.serverinterfaces.YouScopeServer: Returns a provider for the construction of measurement components, e.g.
getComponentTypeIdentifiers(Class<? extends Configuration>) - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns the type identifiers of all component addons capable of consuming and creating configuration being sub-classes of the provided configuration class.
getComponentTypeIdentifiers() - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns the type identifiers of all components.
getConfiguration() - Method in interface org.youscope.addon.component.ComponentAddonUI: Returns the configuration data.
getConfiguration() - Method in class org.youscope.addon.component.ComponentAddonUIAdapter
getConfiguration() - Method in class org.youscope.addon.component.generic.PropertyEditorAdapter
getConfiguration() - Method in class org.youscope.common.resource.ResourceAdapter
getConfiguration() - Method in interface org.youscope.common.saving.MeasurementSaver: Returns the configuration of the measurement, or null if the configuration is unknown.
getConfiguration() - Method in class org.youscope.plugin.microplatejob.MicroplateJobConfigurationAddon
getConfiguration() - Method in class org.youscope.uielements.SingleComponentDefinitionPanel: Returns the current state of the configuration.
getConfiguration() - Method in class org.youscope.uielements.SubConfigurationPanel: Returns the current configuration, or null if no configuration option is present.
getConfigurationClass() - Method in class org.youscope.addon.component.ComponentAddonUIAdapter: Returns the configuration class.
getConfigurationClass() - Method in interface org.youscope.addon.component.ComponentMetadata: Returns the class of the configuration of the measurement component.
getConfigurationClass() - Method in class org.youscope.addon.component.ComponentMetadataAdapter
getConfigurationClass() - Method in class org.youscope.addon.component.GenericComponentMetadata
getConfigurationClasses() - Method in interface org.youscope.addon.XMLConfigurationProvider: Returns an list of all classes which can be saved to XML.
getConfigurationData() - Method in class org.youscope.plugin.microplatejob.JobConfigurationPanel: Returns the configuration data of the job which got configured.
getConfigurationData() - Method in class org.youscope.uielements.TaskConfigurationPanel: Returns the configuration data.
getConfigurationFile() - Method in class org.youscope.plugin.cellx.CellXConfiguration: Returns the path to the file which contains the configuration settings for the CellX algorithm.
getConfigurationMetadata() - Method in class org.youscope.uielements.SingleComponentDefinitionPanel: Returns the metadata of the currently active configuration, or null if no addon is available.
getConsumedTableDefinition() - Method in interface org.youscope.common.table.TableConsumer: Returns the definition of the table layout of the tables consumed by this consumer, e.g.
getConsumedTableDefinition() - Method in interface org.youscope.common.table.TableConsumerConfiguration: Returns a information about the layout of the tables which are consumed by the TableConsumer, e.g.
getConsumedTableDefinition() - Method in class org.youscope.plugin.devicejob.DeviceJobConfiguration
getConsumedTableDefinition() - Method in class org.youscope.plugin.fluigent.FluigentJobConfiguration
getConsumedTableDefinition() - Method in class org.youscope.plugin.nemesys.NemesysJobConfiguration
getConsumedTableDefinition() - Method in class org.youscope.plugin.onix.OnixJobConfiguration
getContainingFrame() - Method in class org.youscope.addon.AddonUIAdapter: Returns the frame containing this addon.
getControlImageSaveName() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionJobConfiguration: Returns the name under which the control image should be saved.
getController() - Method in interface org.youscope.plugin.dropletmicrofluidics.DropletMicrofluidicJob: Returns the control algorithm used to correct droplet heights by changing inflow or outflow.
getControllerConfiguration() - Method in class org.youscope.plugin.dropletmicrofluidics.DropletMicrofluidicJobConfiguration: Returns the configuration of the controll algorithm.
getControllerScripScript() - Method in interface org.youscope.plugin.controller.ControllerJob: Returns the script of the controller which gets evaluated by the script engine.
getControllerScript() - Method in class org.youscope.plugin.controller.ControllerJobConfiguration: Returns the script of the controller, i.e.
getControllerScriptEngine() - Method in interface org.youscope.plugin.controller.ControllerJob: Returns the name of the script engine, or null, if script engine is not set.
getControllerScriptEngine() - Method in class org.youscope.plugin.controller.ControllerJobConfiguration: Returns the name of the script engine with which the controller script should be executed.
getControllerTableSaveName() - Method in class org.youscope.plugin.controller.ControllerJobConfiguration: Returns the name of the file (without file extension) under which the input/output data of the controller should be saved.
getCPUArchitecture() - Method in class org.youscope.common.YouScopeVersion
getCreationTime() - Method in class org.youscope.common.image.ImageEvent: Returns the time milliseconds since January 1, 1970, 00:00:00 GMT when the image was created (see Date.Date(long)).
getCreationTime() - Method in class org.youscope.common.table.Table: Returns the time in milliseconds after January 1, 1970 00:00:00 GMT, when the content of this table was created.
getCurrentChannel() - Method in interface org.youscope.plugin.usercontrolmeasurement.UserControlMeasurementCallback: Returns the currently selected channel, or null.
getCurrentChannelGroup() - Method in interface org.youscope.plugin.usercontrolmeasurement.UserControlMeasurementCallback: Returns the currently selected channel group, or null.
getCurrentDroplet() - Method in class org.youscope.addon.dropletmicrofluidics.DropletObserverResult: Returns the ID of the currently measured droplet.
getCurrentExposure() - Method in interface org.youscope.plugin.usercontrolmeasurement.UserControlMeasurementCallback: Returns the currently selected exposure in ms.
getCurrentMeasurement() - Method in class org.youscope.server.YouScopeServerImpl
getCurrentMeasurement() - Method in interface org.youscope.serverinterfaces.YouScopeServer: Returns the currently running measurement or NULL, if none is running.
getCurrentOffset() - Method in class org.youscope.addon.dropletmicrofluidics.DropletObserverResult: Returns the estimated offset of the currently measured droplet.
getCurrentScore() - Method in interface org.youscope.addon.microscopeaccess.AutoFocusDeviceInternal: Returns the current focus score
getCurrentScore() - Method in interface org.youscope.common.microscope.AutoFocusDevice: Returns the current focus score
getCustomJobName() - Method in class org.youscope.plugin.customjob.CustomJobConfiguration: Returns the name or ID of the custom job, with which it is identified.
getDefaultAsBoolean() - Method in enum org.youscope.clientinterfaces.StandardProperty: Returns the default value as a boolean.
getDefaultAsDouble() - Method in enum org.youscope.clientinterfaces.StandardProperty: Returns the default value as a double.
getDefaultAsInteger() - Method in enum org.youscope.clientinterfaces.StandardProperty: Returns the default value as an integer.
getDefaultAsString() - Method in enum org.youscope.clientinterfaces.StandardProperty: Returns the default value as a string.
getDefaultName() - Method in class org.youscope.common.job.JobAdapter: Should return a default name for the job type which gets returned by getJobName() if no job name was set explicitly by setJobName.
getDefaultValue() - Method in interface org.youscope.addon.microscopeaccess.PreInitDevicePropertyInternal: Returns the default value for this property.
getDefaultValue() - Method in enum org.youscope.clientinterfaces.StandardProperty: returns the default value of the property.
getDefaultValue() - Method in interface org.youscope.common.microscope.PreInitDeviceProperty: Returns the default value for this property.
getDefaultValueType() - Method in enum org.youscope.clientinterfaces.StandardProperty: Returns the class of the default property.
getDeltaFlow() - Method in class org.youscope.addon.dropletmicrofluidics.DropletControllerResult: Returns the difference between target flow rate and actual flow rates.
getDeltaX() - Method in interface org.youscope.plugin.composedimaging.ComposedImagingJob: Returns the distance between two horizontally attached sub-images.
getDeltaX() - Method in interface org.youscope.plugin.composedimaging.PlateScanningJob: Returns the distance between two horizontally attached sub-images.
getDeltaX() - Method in class org.youscope.plugin.composedimaging.PlateScanningJobConfiguration
getDeltaX() - Method in interface org.youscope.plugin.composedimaging.StaggeringJob: Returns the distance between two horizontally attached sub-images.
getDeltaX() - Method in class org.youscope.plugin.composedimaging.StaggeringJobConfiguration
getDeltaY() - Method in interface org.youscope.plugin.composedimaging.ComposedImagingJob: Returns the distance between two vertically attached sub-images.
getDeltaY() - Method in interface org.youscope.plugin.composedimaging.PlateScanningJob: Returns the distance between two vertically attached sub-images.
getDeltaY() - Method in class org.youscope.plugin.composedimaging.PlateScanningJobConfiguration
getDeltaY() - Method in interface org.youscope.plugin.composedimaging.StaggeringJob: Returns the distance between two vertically attached sub-images.
getDeltaY() - Method in class org.youscope.plugin.composedimaging.StaggeringJobConfiguration
getDescription() - Method in interface org.youscope.addon.microscopeaccess.AvailableDeviceDriverInternal: Returns the description of the device driver.
getDescription() - Method in enum org.youscope.clientinterfaces.FramePositionStorageType: Returns a short human readable description of this storage type.
getDescription() - Method in class org.youscope.common.job.JobConfiguration: Returns a short description of this job.
getDescription() - Method in interface org.youscope.common.microscope.AvailableDeviceDriver: Returns the description of the device driver.
getDescription() - Method in enum org.youscope.common.microscope.DeviceType: Returns a human readable name/description of this device type.
getDescription() - Method in class org.youscope.common.task.TaskConfiguration: Returns a description of this task
getDescription() - Method in class org.youscope.plugin.autofocus.AutoFocusJobConfiguration
getDescription() - Method in class org.youscope.plugin.changepositionjob.ChangePositionJobConfiguration
getDescription() - Method in class org.youscope.plugin.composedimaging.ComposedImagingJobConfiguration
getDescription() - Method in class org.youscope.plugin.composedimaging.PlateScanningJobConfiguration
getDescription() - Method in class org.youscope.plugin.composedimaging.StaggeringJobConfiguration
getDescription() - Method in class org.youscope.plugin.compositejob.CompositeJobConfiguration
getDescription() - Method in class org.youscope.plugin.continousimaging.ContinuousImagingJobConfiguration
getDescription() - Method in class org.youscope.plugin.continousimaging.ShortContinuousImagingJobConfiguration
getDescription() - Method in class org.youscope.plugin.controller.ControllerJobConfiguration
getDescription() - Method in class org.youscope.plugin.customjob.CustomJobConfiguration
getDescription() - Method in class org.youscope.plugin.devicejob.DeviceJobConfiguration
getDescription() - Method in class org.youscope.plugin.deviceslides.DeviceSlidesJobConfiguration
getDescription() - Method in class org.youscope.plugin.dropletmicrofluidics.DropletMicrofluidicJobConfiguration
getDescription() - Method in class org.youscope.plugin.fluigent.FluigentJobConfiguration
getDescription() - Method in class org.youscope.plugin.focusingjob.FocusingJobConfiguration
getDescription() - Method in class org.youscope.plugin.imagingjob.ImagingJobConfiguration
getDescription() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionJobConfiguration
getDescription() - Method in class org.youscope.plugin.livemodifiablejob.LiveModifiableJobConfiguration
getDescription() - Method in enum org.youscope.plugin.matlabfocusscores.MatlabScoreType: Returns a human readable short description of the algorithm.
getDescription() - Method in class org.youscope.plugin.microplatejob.MicroplateJobConfiguration
getDescription() - Method in class org.youscope.plugin.multicamerajob.ParallelImagingJobConfiguration
getDescription() - Method in class org.youscope.plugin.nemesys.NemesysJobConfiguration
getDescription() - Method in class org.youscope.plugin.onix.OnixJobConfiguration
getDescription() - Method in class org.youscope.plugin.onoffdevicejob.OnOffDeviceJobConfiguration
getDescription() - Method in class org.youscope.plugin.oscillatinginput.OscillatingDeviceJobConfiguration
getDescription() - Method in class org.youscope.plugin.outoffocus.OutOfFocusJobConfiguration
getDescription() - Method in class org.youscope.plugin.repeatjob.RepeatJobConfiguration
getDescription() - Method in class org.youscope.plugin.scriptingjob.ScriptingJobConfiguration
getDescription() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration
getDescription() - Method in class org.youscope.plugin.statistics.StatisticsJobConfiguration
getDescription() - Method in class org.youscope.plugin.waitforuser.WaitForUserJobConfiguration
getDescription() - Method in class org.youscope.plugin.waitjob.ExecuteAndWaitJobConfiguration
getDescription() - Method in class org.youscope.plugin.waitjob.WaitJobConfiguration
getDescription() - Method in class org.youscope.plugin.zslides.ZSlidesJobConfiguration
getDescription() - Method in class org.youscope.server.AvailableDeviceDriverRMI
getDetectionAlgorithm() - Method in interface org.youscope.plugin.lifecelldetection.CellDetectionJob: Returns the algorithm which should be used for cell detection, or null.
getDetectionAlgorithmConfiguration() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionJobConfiguration: Return the configuration of the cell detection algorithm to use.
getDetectionAlgorithmConfiguration() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionMeasurementConfiguration: Return the configuration of the cell detection algorithm to use.
getDetectionJob() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionJobConfiguration: Returns the job which is used to produce the cell detection image.
getDetectionThreshold() - Method in class org.youscope.plugin.quickdetect.QuickDetectConfiguration: Returns the detection threshold (0-1) of the algorithm.
getDevice(String) - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns the device of this microscope with the given name.
getDevice() - Method in class org.youscope.common.microscope.DeviceSetting: Returns the device of which a property should be changed.
getDevice(String) - Method in interface org.youscope.common.microscope.Microscope: Returns the device of this microscope with the given name.
getDevice() - Method in class org.youscope.plugin.oscillatinginput.OscillatingDeviceJobConfiguration
getDeviceID() - Method in interface org.youscope.addon.microscopeaccess.DeviceInternal: Returns the name of the device.
getDeviceID() - Method in interface org.youscope.addon.microscopeaccess.PropertyInternal: Returns the name of the device where this property belongs to.
getDeviceID() - Method in interface org.youscope.common.microscope.Device: Returns the name of the device.
getDeviceID() - Method in interface org.youscope.common.microscope.Property: Returns the name of the device where this property belongs to.
getDeviceID() - Method in class org.youscope.plugin.microscopeaccess.PropertyImpl
getDeviceLoader() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns a class with which the device driver settings of the microscope can be modified.
getDeviceLoader() - Method in interface org.youscope.common.microscope.Microscope: Returns a class with which the device driver settings of the microscope can be modified.
getDevices() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns a list of all devices of this microscope, or an empty list if this microscope does not have any devices.
getDevices(DeviceType) - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns a list of all devices of the given type, or an empty list if no such device is configured.
getDevices() - Method in interface org.youscope.common.microscope.Microscope: Returns a list of all devices of this microscope, or an empty list if this microscope does not have any devices.
getDevices(DeviceType) - Method in interface org.youscope.common.microscope.Microscope: Returns a list of all devices of the given type, or an empty list if no such device is configured.
getDeviceSettings() - Method in interface org.youscope.common.job.basicjobs.DeviceSettingJob: Returns the device settings made when job runs.
getDeviceSettings() - Method in class org.youscope.plugin.devicejob.DeviceJobConfiguration: Returns the device settings which should be activated by the job.
getDeviceSettingsOff() - Method in class org.youscope.plugin.onoffdevicejob.OnOffDeviceJobConfiguration
getDeviceSettingsOn() - Method in class org.youscope.plugin.onoffdevicejob.OnOffDeviceJobConfiguration
getDeviseSettingsOff() - Method in class org.youscope.common.measurement.MeasurementConfiguration
getDeviseSettingsOn() - Method in class org.youscope.common.measurement.MeasurementConfiguration
getDimension() - Method in class org.youscope.uielements.CellSelectionTable: Returns the number of columns and rows of the table.
getDouble(int) - Method in class org.json.JSONArray: Get the double value associated with an index.
getDouble(String) - Method in class org.json.JSONObject: Get the double value associated with a key.
getDoubleFormat() - Static method in class org.youscope.uielements.StandardFormats: Returns the standard format for doubles (e.g.
getDriverID() - Method in interface org.youscope.addon.microscopeaccess.AvailableDeviceDriverInternal: Returns the identifier of the device driver.
getDriverID() - Method in interface org.youscope.addon.microscopeaccess.DeviceInternal: Returns the Identifier under which this device's driver is defined in the library.
getDriverID() - Method in interface org.youscope.common.microscope.AvailableDeviceDriver: Returns the identifier of the device driver.
getDriverID() - Method in interface org.youscope.common.microscope.Device: Returns the Identifier under which this device's driver is defined in the library.
getDriverID() - Method in class org.youscope.server.AvailableDeviceDriverRMI
getDropletOffset(int) - Method in class org.youscope.addon.dropletmicrofluidics.DropletObserverResult: Returns the offset of the droplet with the given ID.
getDropletOffsets() - Method in class org.youscope.addon.dropletmicrofluidics.DropletObserverResult: Returns the estimated current droplet offsets.
getDropletTableSaveName() - Method in class org.youscope.plugin.dropletmicrofluidics.DropletMicrofluidicJobConfiguration: Returns the file name (without extension) under which the droplet table should be saved.
getDuration() - Method in class org.youscope.uielements.PeriodField: Returns the duration in ms.
getDurationLong() - Method in class org.youscope.uielements.PeriodField: Returns the duration in ms.
getEditableProperties() - Method in interface org.youscope.addon.microscopeaccess.DeviceInternal: Returns a list of all editable properties of this device.
getEditableProperties() - Method in interface org.youscope.common.microscope.Device: Returns a list of all editable properties of this device.
getEditor() - Method in interface org.youscope.addon.component.generic.PropertyEditor: Returns the UI element of the editor.
getEditor() - Method in class org.youscope.addon.component.generic.PropertyEditorAdapter
getEditor(Property, Configuration, YouScopeClient, YouScopeServer) - Method in class org.youscope.addon.component.generic.PropertyEditorManager: Returns an editor for the given property, or throws an exception if no editor is available for the property type.
getElementAt(int) - Method in class org.youscope.uielements.CellSelectionTable.RowHeaderListModel
getEndTime() - Method in interface org.youscope.common.measurement.Measurement: Returns the time when the last execution of this measurement stopped regularly, or null, if it did not yet stop regularly.
getEngineName() - Method in class org.youscope.plugin.matlabscripting.MatlabScriptEngineFactory
getEngineVersion() - Method in class org.youscope.plugin.matlabscripting.MatlabScriptEngineFactory
getEntry(int, int) - Method in class org.youscope.common.table.Table: Returns the entry at the given row and column.
getEntry(int, String) - Method in class org.youscope.common.table.Table: Returns the entry at the given row and column.
getEntry(int, String, Class<T>) - Method in class org.youscope.common.table.Table: Returns the entry at the given row and column, having the given value type.
getEntry(int, ColumnDefinition<T>) - Method in class org.youscope.common.table.Table: Returns the entry at the given row corresponding to the given columnDefinition.
getEntry(int, int, Class<T>) - Method in class org.youscope.common.table.Table: Returns the entry at the given row and column, having the given value type.
getEnvironmentInfo() - Method in class org.youscope.common.YouScopeVersion: Returns version, build number, Java VM, and OS as a List with four entries.
getEscapeQuoteDelimiter(String) - Method in class org.youscope.common.scripting.JavaScriptStyle
getEscapeQuoteDelimiter(String) - Method in class org.youscope.common.scripting.MatlabScriptStyle
getEscapeQuoteDelimiter(String) - Method in interface org.youscope.common.scripting.ScriptStyle: Returns the string used to print the given quote delimiter inside a quote without stopping the quote (if quote delimiter is e.g.
getEscapeQuoteDelimiter(String) - Method in class org.youscope.plugin.onix.OnixScriptStyle
getEvaluationNumber() - Method in class org.youscope.common.ExecutionInformation: Returns the main evaluation number, i.e.
getEvaluationString() - Method in class org.youscope.common.ExecutionInformation: Returns a string with the evaluation number followed by the loop numbers, separated by dashes.
getExecutionInformation() - Method in class org.youscope.common.image.ImageEvent: Returns the information of how often the image producing job was already executed when producing the image.
getExecutionInformation() - Method in class org.youscope.common.table.Table: Returns logical information of when during the measurement execution the table was created.
getExplicitDelay() - Method in interface org.youscope.addon.microscopeaccess.DeviceInternal: Returns the explicit device delay in ms.
getExplicitDelay() - Method in interface org.youscope.common.microscope.Device: Returns the explicit device delay in ms.
getExposure() - Method in interface org.youscope.common.job.basicjobs.ContinuousImagingJob: Gets the exposure.
getExposure() - Method in interface org.youscope.common.job.basicjobs.ImagingJob: Gets the exposure.
getExposure() - Method in interface org.youscope.plugin.autofocus.AutoFocusJob: Gets the exposure.
getExposure() - Method in class org.youscope.plugin.autofocus.AutoFocusJobConfiguration
getExposure() - Method in interface org.youscope.plugin.composedimaging.ComposedImagingJob: Gets the exposure.
getExposure() - Method in class org.youscope.plugin.composedimaging.ComposedImagingJobConfiguration
getExposure() - Method in class org.youscope.plugin.composedimaging.ComposedImagingMeasurementConfiguration: Returns the exposure time.
getExposure() - Method in class org.youscope.plugin.continousimaging.ContinousImagingMeasurementConfiguration
getExposure() - Method in class org.youscope.plugin.continousimaging.ContinuousImagingJobConfiguration
getExposure() - Method in interface org.youscope.plugin.continousimaging.ShortContinuousImagingJob: Gets the exposure.
getExposure() - Method in class org.youscope.plugin.continousimaging.ShortContinuousImagingJobConfiguration
getExposure() - Method in class org.youscope.plugin.imagingjob.ImagingJobConfiguration
getExposure() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionMeasurementConfiguration
getExposure() - Method in class org.youscope.plugin.onoffdevicejob.OnOffDeviceJobConfiguration
getExposure() - Method in interface org.youscope.plugin.outoffocus.OutOfFocusJob: Gets the exposure.
getExposure() - Method in class org.youscope.plugin.outoffocus.OutOfFocusJobConfiguration
getExposure() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration
getExposure() - Method in class org.youscope.uielements.LiveStreamPanel.ChannelControl: Returns the currently selected exposure time in ms.
getExposures() - Method in interface org.youscope.common.job.basicjobs.ContinuousImagingJob: Gets the exposures of the initialized cameras.
getExposures() - Method in interface org.youscope.common.job.basicjobs.ImagingJob: Gets the exposures of the initialized cameras.
getExposures() - Method in interface org.youscope.plugin.composedimaging.ComposedImagingJob: Gets the exposures of the initialized cameras.
getExposures() - Method in interface org.youscope.plugin.continousimaging.ShortContinuousImagingJob: Gets the exposures of the initialized cameras.
getExposures() - Method in class org.youscope.plugin.multicameracontinuousimaging.MultiCameraContinousImagingConfiguration
getExposures() - Method in class org.youscope.plugin.multicamerajob.ParallelImagingJobConfiguration
getExtensions() - Method in class org.youscope.plugin.matlabscripting.MatlabScriptEngineFactory
getFactory() - Method in class org.youscope.plugin.matlabscripting.MatlabScriptEngine
getFileName() - Method in class org.youscope.plugin.statistics.StatisticsJobConfiguration: Returns the file name where statistical data is saved.
getFileNameExtensions() - Method in class org.youscope.common.scripting.JavaScriptStyle
getFileNameExtensions() - Method in class org.youscope.common.scripting.MatlabScriptStyle
getFileNameExtensions() - Method in interface org.youscope.common.scripting.ScriptStyle: Returns an array of all file name extensions typically associated with scripts for which this style is made.
getFileNameExtensions() - Method in class org.youscope.plugin.onix.OnixScriptStyle
getFloatValue() - Method in interface org.youscope.addon.microscopeaccess.FloatPropertyInternal: Returns the current value of the device property as a float.
getFloatValue() - Method in class org.youscope.common.microscope.DeviceSetting: Returns the value of the setting as a float.
getFloatValue() - Method in interface org.youscope.common.microscope.FloatProperty: Returns the current value of the device property as a float.
getFlowRate(int) - Method in class org.youscope.addon.dropletmicrofluidics.DropletControllerResult: Returns the flow rate in ul/min of the given flow unit.
getFlowRate(int) - Method in interface org.youscope.plugin.fluigent.FluigentScriptCallback: Returns the current flow rate of a given flow unit.
getFlowRate(int) - Method in interface org.youscope.plugin.nemesys.NemesysScriptCallback: Returns the current flow rate of a given dosing unit.
getFlowRateMax(int) - Method in interface org.youscope.plugin.nemesys.NemesysScriptCallback: Returns the maximal flow rate of a given dosing unit.
getFlowRates() - Method in class org.youscope.addon.dropletmicrofluidics.DropletControllerResult: Returns the flow rates in ul/min.
getFlowUnit(int) - Method in interface org.youscope.plugin.nemesys.NemesysScriptCallback: Returns the unit identifier of the flow rate.
getFluigentDevice() - Method in class org.youscope.plugin.fluigent.FluigentJobConfiguration: Returns the ID of the Fluigent device which should be controlled, or null if yet not set.
getFluigentDeviceName() - Method in interface org.youscope.plugin.fluigent.FluigentJob: Returns the name of the Fluigent device.
getFocus() - Method in class org.youscope.plugin.microplatemeasurement.XYAndFocusPosition: Returns the focus position.
getFocusAdjustmentTime() - Method in interface org.youscope.common.job.basicjobs.FocusingJob: Returns the focus adjustment time (the time the microscope is paused after the new focus position was set) in ms.
getFocusAdjustmentTime() - Method in interface org.youscope.plugin.autofocus.AutoFocusJob: Returns the focus adjustment time (the time the microscope is paused after the new focus position was set) in ms.
getFocusAdjustmentTime() - Method in interface org.youscope.plugin.outoffocus.OutOfFocusJob: Returns the focus adjustment time (the time the microscope is paused after the new focus position was set) in ms.
getFocusConfiguration() - Method in class org.youscope.plugin.autofocus.AutoFocusJobConfiguration
getFocusConfiguration() - Method in class org.youscope.plugin.focusingjob.FocusingJobConfiguration
getFocusConfiguration() - Method in class org.youscope.plugin.microplatejob.MicroplateJobConfiguration
getFocusConfiguration() - Method in class org.youscope.plugin.microplatemeasurement.MicroplateMeasurementConfiguration
getFocusConfiguration() - Method in class org.youscope.plugin.outoffocus.OutOfFocusJobConfiguration
getFocusConfiguration() - Method in class org.youscope.plugin.zslides.ZSlidesJobConfiguration
getFocusConfiguration() - Method in class org.youscope.uielements.FocusField: Returns the currently selected focus device configuration.
getFocusDevice() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns the current default focus device.
getFocusDevice(String) - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns the focus device with the given name.
getFocusDevice() - Method in class org.youscope.common.configuration.FocusConfiguration
getFocusDevice() - Method in interface org.youscope.common.job.basicjobs.FocusingJob: Returns the focus device name for which the position should be changed.
getFocusDevice() - Method in interface org.youscope.common.microscope.Microscope: Returns the current default focus device.
getFocusDevice(String) - Method in interface org.youscope.common.microscope.Microscope: Returns the focus device with the given name.
getFocusDevice() - Method in interface org.youscope.plugin.autofocus.AutoFocusJob: Returns the focus device name for which the position should be changed.
getFocusDevice() - Method in interface org.youscope.plugin.outoffocus.OutOfFocusJob: Returns the focus device name for which the position should be changed.
getFocusDevice() - Method in class org.youscope.uielements.FocusField: Returns the currently selected focus device, or null if no focus device can be selected since there are no focus device.
getFocusDevices() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns a list of all installed focus devices.
getFocusDevices() - Method in interface org.youscope.common.microscope.Microscope: Returns a list of all installed focus devices.
getFocusLowerBound() - Method in class org.youscope.plugin.brentfocussearch.BrentFocusSearchConfiguration: Returns the minimal relative focus.
getFocusLowerBound() - Method in class org.youscope.plugin.exhaustivefocussearch.ExhaustiveFocusSearchConfiguration: Returns the minimal relative focus.
getFocusPosition() - Method in interface org.youscope.addon.microscopeaccess.FocusDeviceInternal: Returns the position of the focus device.
getFocusPosition() - Method in interface org.youscope.common.microscope.FocusDevice: Returns the position of the focus device.
getFocusPosition() - Method in class org.youscope.plugin.microscopeaccess.FocusDeviceImpl
getFocusScore(double) - Method in interface org.youscope.addon.focussearch.FocusSearchOracle: Returns the focal score for a given focal plane.
getFocusScoreAlgorithm() - Method in interface org.youscope.plugin.autofocus.AutoFocusJob: Returns the focus algorithm with which it is detected if the focus of an image made at a give focus position is better than the other.
getFocusScoreAlgorithm() - Method in class org.youscope.plugin.autofocus.AutoFocusJobConfiguration: Returns the focus algorithm with which it is detected if the focus of an image made at a give focus position is better than the other.
getFocusSearchAlgorithm() - Method in interface org.youscope.plugin.autofocus.AutoFocusJob: Returns the algorithm with which it is determined at which focus positions images are made to determine the best focal plane.
getFocusSearchAlgorithm() - Method in class org.youscope.plugin.autofocus.AutoFocusJobConfiguration: Returns the focus search algorithm.
getFocusTableSaveName() - Method in class org.youscope.plugin.autofocus.AutoFocusJobConfiguration: Returns the name under which the focus-table is saved, or null, if it is not saved.
getFocusUpperBound() - Method in class org.youscope.plugin.brentfocussearch.BrentFocusSearchConfiguration: Returns the maximal relative focus.
getFocusUpperBound() - Method in class org.youscope.plugin.exhaustivefocussearch.ExhaustiveFocusSearchConfiguration: Returns the maximal relative focus.
getFolderStructureType() - Method in class org.youscope.plugin.standardsavesettings.StandardSaveSettingsConfiguration: Returns the type of the standard folder structure.
getFrameListener() - Method in class org.youscope.uielements.ImagePanel: Returns a frame listener which can be added to the frame to which this panel is added, taking care of all default behavior.
getFrameListener() - Method in class org.youscope.uielements.LiveStreamPanel: Returns a frame listener which can be added to the frame to which this panel is added, taking care that the LiveStream automatically stops when the frame closes (and, that it automatically starts when the frame opens, if autostart is set to true).
getFullInvokeString() - Method in class org.youscope.addon.celldetection.utils.MatlabFunctionCreator: Returns a string with which the Matlab function can be called.
getFullVersion() - Method in class org.youscope.common.YouScopeVersion: Returns the version accompanied by the build number of the software (if known).
getFunctionCallString() - Method in class org.youscope.addon.celldetection.utils.MatlabFunctionCreator: Returns a string with which the Matlab function can be called.
getFunctionName() - Method in class org.youscope.addon.celldetection.utils.MatlabFunctionCreator: Returns the name of the function created.
getFunctionPath() - Method in class org.youscope.addon.celldetection.utils.MatlabFunctionCreator: Returns the path to the temporary directory where the created Matlab function is stored.
getGeneralAddons() - Method in interface org.youscope.serverinterfaces.YouScopeServerProperties: Returns an array of all general purpose addons known by the server.
getGetter() - Method in class org.youscope.addon.component.generic.Property: Returns the getter method for this property.
getGlowStrength() - Method in class org.youscope.plugin.glowvisualizer.GlowVisualizerConfiguration: Returns the strength in which the cells should be glowing.
getHeight() - Method in class org.youscope.common.image.ImageEvent: Returns image height in pixels.
getHistogram(BufferedImage, int) - Static method in class org.youscope.common.util.ImageTools: Generates a histogram for the given image.
getHistogram(ImageEvent<?>, int) - Static method in class org.youscope.common.util.ImageTools: Generates a histogram for the given image.
getIcon() - Method in interface org.youscope.addon.AddonMetadata: Returns an icon representative for this addon, or null if no icon is set.
getIcon() - Method in class org.youscope.addon.AddonMetadataAdapter
getIcon() - Method in class org.youscope.addon.component.GenericComponentMetadata
getIdentifier() - Method in enum org.youscope.clientinterfaces.FramePositionStorageType: Returns the identifier of this storage type.
getImage() - Method in class org.youscope.common.image.ImageAdapter: Returns the last image received by this adapter.
getImageBufferSize() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeConfigurationInternal: Returns the size of the internally used image buffer.
getImageBufferSize() - Method in interface org.youscope.common.microscope.MicroscopeConfiguration: Returns the size of the internally used image buffer.
getImageData() - Method in class org.youscope.common.image.ImageEvent: Returns the pixel data as an array of primitive types (typically byte or short).
getImageDataArrayType() - Method in class org.youscope.common.image.ImageEvent: Returns the class of the array in which the image data is stored.
getImageDataType() - Method in class org.youscope.common.image.ImageEvent: Returns the class of the primitive type in which one pixel of the image data is stored.
getImageDescription() - Method in interface org.youscope.common.image.ImageProducer: Returns a short string describing the images which are made by this job.
getImageExtension(ImageEvent<?>, String) - Method in interface org.youscope.common.saving.SaveSettings: Returns a extension/file type (without a dot, e.g.
getImageExtension(ImageEvent<?>, String) - Method in class org.youscope.plugin.standardsavesettings.StandardSaveSettings
getImageFileName() - Method in class org.youscope.plugin.standardsavesettings.StandardSaveSettingsConfiguration
getImageFilePath(ImageEvent<?>, String) - Method in interface org.youscope.common.saving.SaveSettings: Returns a file path (with extension) where an image with a given name should be saved.
getImageFilePath(ImageEvent<?>, String) - Method in class org.youscope.plugin.standardsavesettings.StandardSaveSettings
getImageFileType() - Method in class org.youscope.plugin.standardsavesettings.StandardSaveSettingsConfiguration
getImageMetadataTableFilePath() - Method in interface org.youscope.common.saving.SaveSettings: Returns a file path (with extension) where the table storing metadata about the images should be stored.
getImageMetadataTableFilePath() - Method in class org.youscope.plugin.standardsavesettings.StandardSaveSettings
getImageSaveName() - Method in class org.youscope.plugin.autofocus.AutoFocusJobConfiguration: Returns the name under which the images should be saved.
getImageSaveName() - Method in class org.youscope.plugin.composedimaging.ComposedImagingJobConfiguration: Returns the name under which images of this job should be saved.
getImageSaveName() - Method in class org.youscope.plugin.composedimaging.ComposedImagingMeasurementConfiguration: Returns the name under which the images are saved.
getImageSaveName() - Method in class org.youscope.plugin.continousimaging.ContinousImagingMeasurementConfiguration: Returns the name under which the images should be saved.
getImageSaveName() - Method in class org.youscope.plugin.continousimaging.ContinuousImagingJobConfiguration: Returns the name under which the images should be saved.
getImageSaveName() - Method in class org.youscope.plugin.continousimaging.ShortContinuousImagingJobConfiguration: Returns the name under which the images should be saved.
getImageSaveName() - Method in class org.youscope.plugin.imagingjob.ImagingJobConfiguration: Returns the name under which the images should be saved.
getImageSaveName() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionMeasurementConfiguration: Returns the name under which the image should be saved.
getImageSaveName() - Method in class org.youscope.plugin.multicameracontinuousimaging.MultiCameraContinousImagingConfiguration: Returns the name under which the image should be saved.
getImageSaveName() - Method in class org.youscope.plugin.multicamerajob.ParallelImagingJobConfiguration: Returns the name under which the images are saved.
getImageSaveName() - Method in class org.youscope.plugin.outoffocus.OutOfFocusJobConfiguration: Returns the name under which the images should be saved.
getImageSaveName() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration: Returns the name under which the images should be saved.
getImageSaveNames() - Method in interface org.youscope.common.image.ImageProducerConfiguration: Should return the names of all images produced by this job and which should be saved to disk.
getImageSaveNames() - Method in class org.youscope.plugin.autofocus.AutoFocusJobConfiguration
getImageSaveNames() - Method in class org.youscope.plugin.composedimaging.ComposedImagingJobConfiguration
getImageSaveNames() - Method in class org.youscope.plugin.continousimaging.ContinuousImagingJobConfiguration
getImageSaveNames() - Method in class org.youscope.plugin.continousimaging.ShortContinuousImagingJobConfiguration
getImageSaveNames() - Method in class org.youscope.plugin.glowvisualizer.GlowVisualizerConfiguration
getImageSaveNames() - Method in class org.youscope.plugin.imagingjob.ImagingJobConfiguration
getImageSaveNames() - Method in class org.youscope.plugin.labelvisualizer.LabelVisualizerConfiguration
getImageSaveNames() - Method in class org.youscope.plugin.multicamerajob.ParallelImagingJobConfiguration
getImageSaveNames() - Method in class org.youscope.plugin.outoffocus.OutOfFocusJobConfiguration
getImageSaveNames() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration
getImageSaveNamesRecursive(JobConfiguration) - Static method in class org.youscope.common.util.ConfigurationValidation: Returns a collection of all image save names defined by the given job and all of its subJobs.
getImageSize(int) - Method in interface org.youscope.addon.microscopeaccess.CameraDeviceInternal: Returns the size (in pixels) of the images this camera produces.
getImageSize() - Method in interface org.youscope.common.microscope.CameraDevice: Returns the size (in pixels) of the images this camera produces.
getImageSynchronizationDevices() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeConfigurationInternal: Returns the devices to which the microscope synchronizes when imaging.
getImageSynchronizationDevices() - Method in interface org.youscope.common.microscope.MicroscopeConfiguration: Returns the devices to which the microscope synchronizes when imaging.
getImagingPeriod() - Method in class org.youscope.plugin.continousimaging.ContinousImagingMeasurementConfiguration
getImagingPeriod() - Method in interface org.youscope.plugin.continousimaging.ShortContinuousImagingJob
getImagingPeriod() - Method in class org.youscope.plugin.continousimaging.ShortContinuousImagingJobConfiguration
getImagingPeriod() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionMeasurementConfiguration
getImagingPeriod() - Method in class org.youscope.plugin.multicameracontinuousimaging.MultiCameraContinousImagingConfiguration
getImagingPeriod() - Method in class org.youscope.uielements.LiveStreamPanel.ChannelControl: Returns the currently selected imaging period in ms.
getInitializationTime() - Method in interface org.youscope.addon.microscopeaccess.DeviceInternal: Returns the time when the device was initialized.
getInitialPhase() - Method in class org.youscope.plugin.oscillatinginput.OscillatingDeviceJobConfiguration: Returns the initial phase of the oscillations in rad.
getInnerRadius() - Method in interface org.youscope.plugin.slimjob.SlimJob: Returns the radius of the inner circle (the hole in the "donut").
getInnerRadius() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration: Returns the radius of the inner circle (the hole in the "donut").
getInput(int, String) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the input from the input data table with the given row, and from the column with the given header.
getInput(int, int) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the input from the input data table with the given row, and the given column.
getInputAsBoolean(int, String) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the input from the input data table with the given row, and from the column with the given header.
getInputAsBoolean(int, int) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the input from the input data table with the given row, and the given column.
getInputAsDouble(int, String) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the input from the input data table with the given row, and from the column with the given header.
getInputAsDouble(int, int) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the input from the input data table with the given row, and the given column.
getInputAsFloat(int, String) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the input from the input data table with the given row, and from the column with the given header.
getInputAsFloat(int, int) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the input from the input data table with the given row, and the given column.
getInputAsInteger(int, String) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the input from the input data table with the given row, and from the column with the given header.
getInputAsInteger(int, int) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the input from the input data table with the given row, and the given column.
getInputAsLong(int, String) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the input from the input data table with the given row, and from the column with the given header.
getInputAsLong(int, int) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the input from the input data table with the given row, and the given column.
getInputAsString(int, String) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the input from the input data table with the given row, and from the column with the given header.
getInputAsString(int, int) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the input from the input data table with the given row, and the given column.
getInputJob() - Method in interface org.youscope.plugin.controller.ControllerJob: Returns the job which is used to produce the input for the controller.
getInputJob() - Method in class org.youscope.plugin.controller.ControllerJobConfiguration: Returns the job which is used to produce the input for the controller.
getInputJob() - Method in interface org.youscope.plugin.dropletmicrofluidics.DropletMicrofluidicJob: Returns the job which is used to produce the input for the controller, i.e.
getInt(int) - Method in class org.json.JSONArray: Get the int value associated with an index.
getInt(String) - Method in class org.json.JSONObject: Get the int value associated with a key.
getIntegerFormat() - Static method in class org.youscope.uielements.StandardFormats: Returns the standard format for integers (e.g.
getIntegerValue() - Method in interface org.youscope.addon.microscopeaccess.IntegerPropertyInternal: Returns the current value of the device property as an integer.
getIntegerValue() - Method in class org.youscope.common.microscope.DeviceSetting: Returns the value of the setting as an integer.
getIntegerValue() - Method in interface org.youscope.common.microscope.IntegerProperty: Returns the current value of the device property as an integer.
getInternalBinning() - Method in class org.youscope.plugin.quickdetect.QuickDetectConfiguration: Returns the binning internally used by the algorithm.
getIP() - Method in interface org.youscope.serverinterfaces.YouScopeServerProperties: Returns the IP address of the server.
getItems(FileNameComboBox.Type) - Static method in class org.youscope.plugin.standardsavesettings.FileNameComboBox
getJavaVM() - Method in class org.youscope.common.YouScopeVersion
getJob(int) - Method in class org.youscope.common.job.EditableJobContainerAdapter
getJob(int) - Method in interface org.youscope.common.job.JobContainer: Returns the job at the given index in this container.
getJobs() - Method in class org.youscope.common.job.EditableJobContainerAdapter
getJobs() - Method in interface org.youscope.common.job.JobContainer: Returns a list of all jobs contained in this container.
getJobs() - Method in interface org.youscope.common.job.JobContainerConfiguration: Returns the job list which might be edited by the caller.
getJobs() - Method in class org.youscope.common.task.TaskConfiguration
getJobs() - Method in class org.youscope.plugin.autofocus.AutoFocusJobConfiguration
getJobs() - Method in class org.youscope.plugin.composedimaging.PlateScanningJobConfiguration
getJobs() - Method in class org.youscope.plugin.composedimaging.StaggeringJobConfiguration
getJobs() - Method in class org.youscope.plugin.compositejob.CompositeJobConfiguration
getJobs() - Method in class org.youscope.plugin.customjob.CustomJobConfiguration
getJobs() - Method in class org.youscope.plugin.deviceslides.DeviceSlidesJobConfiguration
getJobs() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionJobConfiguration
getJobs() - Method in class org.youscope.plugin.livemodifiablejob.LiveModifiableJobConfiguration
getJobs() - Method in class org.youscope.plugin.microplatejob.MicroplateJobConfiguration
getJobs() - Method in class org.youscope.plugin.microplatemeasurement.MicroplateMeasurementConfiguration
getJobs() - Method in class org.youscope.plugin.repeatjob.RepeatJobConfiguration
getJobs() - Method in class org.youscope.plugin.scriptingjob.ScriptingJobConfiguration
getJobs() - Method in class org.youscope.plugin.simplemeasurement.SimpleMeasurementConfiguration
getJobs() - Method in class org.youscope.plugin.statistics.StatisticsJobConfiguration
getJobs() - Method in class org.youscope.plugin.waitjob.ExecuteAndWaitJobConfiguration
getJobs() - Method in class org.youscope.plugin.zslides.ZSlidesJobConfiguration
getJobs() - Method in class org.youscope.uielements.JobsDefinitionPanel: Returns a list with all configured jobs.
getJSONArray(int) - Method in class org.json.JSONArray: Get the JSONArray associated with an index.
getJSONArray(String) - Method in class org.json.JSONObject: Get the JSONArray value associated with a key.
getJSONObject(int) - Method in class org.json.JSONArray: Get the JSONObject associated with an index.
getJSONObject(String) - Method in class org.json.JSONObject: Get the JSONObject value associated with a key.
getLabelImage() - Method in class org.youscope.addon.celldetection.CellDetectionResult: Returns the detection image.
getLag() - Method in class org.youscope.plugin.simplefocusscores.AutocorrelationFocusScoreConfiguration: Returns the lag between the two autocorrelations (in pixels).
getLanguageName() - Method in class org.youscope.plugin.matlabscripting.MatlabScriptEngineFactory
getLanguageVersion() - Method in class org.youscope.plugin.matlabscripting.MatlabScriptEngineFactory
getLastConfigurationWarning() - Method in interface org.youscope.common.microscope.Microscope: Returns the warning message generated and returned when loaded the last configuration, or null if no warning appeared.
getLastImageBitDepth() - Method in interface org.youscope.common.scripting.ScriptImageStorage: Gets bit depth of last image.
getLastImageBytesPerPixel() - Method in interface org.youscope.common.scripting.ScriptImageStorage: Returns how many bytes correspond to one pixel.
getLastImageCoding() - Method in interface org.youscope.common.scripting.ScriptImageStorage: Returns a string describing the data type to which the result of getLastImagePixels() has to be converted.
getLastImageHeight() - Method in interface org.youscope.common.scripting.ScriptImageStorage: Gets the heigt of the last image.
getLastImagePixels() - Method in interface org.youscope.common.scripting.ScriptImageStorage: Returns the pixels of the last image made.
getLastImageWidth() - Method in interface org.youscope.common.scripting.ScriptImageStorage: Gets the width of the last image.
getLastMeasurementFolder() - Method in interface org.youscope.common.saving.MeasurementSaver: Returns the path to the last run of this measurement.
getLastSavedMeasurements() - Method in interface org.youscope.clientinterfaces.YouScopeClient: Returns a list of the last saved mesurements.
getLastScore() - Method in interface org.youscope.addon.microscopeaccess.AutoFocusDeviceInternal: Returns the last focus score.
getLastScore() - Method in interface org.youscope.common.microscope.AutoFocusDevice: Returns the last focus score.
getLastScore() - Method in interface org.youscope.plugin.matlabfocusscores.FocusSink: Returns the last focus score.
getLibraryID() - Method in interface org.youscope.addon.microscopeaccess.AvailableDeviceDriverInternal: Returns the name of the library where this device is implemented.
getLibraryID() - Method in interface org.youscope.addon.microscopeaccess.DeviceInternal: Returns the library name in which this device's driver is defined.
getLibraryID() - Method in interface org.youscope.common.microscope.AvailableDeviceDriver: Returns the name of the library where this device is implemented.
getLibraryID() - Method in interface org.youscope.common.microscope.Device: Returns the library name in which this device's driver is defined.
getLibraryID() - Method in class org.youscope.server.AvailableDeviceDriverRMI
getLine(int) - Method in class org.youscope.client.uielements.DefaultQuickLoggerModel
getLine(int) - Method in interface org.youscope.client.uielements.QuickLoggerModel: Returns the message at the line with the given index.
getLine() - Method in exception org.youscope.common.microscope.MicroscopeConfigurationException: Returns the line of the configuration which could not be parsed, or null if line is unknown.
getLineNumber() - Method in exception org.youscope.common.microscope.MicroscopeConfigurationException: Returns the line number in the configuration where the error occurred, or -1 if the line is unknown.
getLineTime(int) - Method in class org.youscope.client.uielements.DefaultQuickLoggerModel
getLineTime(int) - Method in interface org.youscope.client.uielements.QuickLoggerModel: Returns a string describing the creation time of the message, or null if not the first line of a message.
getListCellRendererComponent(JList<? extends String>, String, int, boolean, boolean) - Method in class org.youscope.uielements.CellSelectionTable.RowHeaderRenderer
getLogErrFilePath() - Method in interface org.youscope.common.saving.SaveSettings: Returns the file path for the error log file (with extension).
getLogErrFilePath() - Method in class org.youscope.plugin.standardsavesettings.StandardSaveSettings
getLogger() - Method in interface org.youscope.serverinterfaces.ConstructionContext: Returns a message listener which can be used for logging/displaying short status messages or errors similar to System.out and System.err.
getLogOutFilePath() - Method in interface org.youscope.common.saving.SaveSettings: Returns the file path for the standard output log file (with extension).
getLogOutFilePath() - Method in class org.youscope.plugin.standardsavesettings.StandardSaveSettings
getLong(int) - Method in class org.json.JSONArray: Get the long value associated with an index.
getLong(String) - Method in class org.json.JSONObject: Get the long value associated with a key.
getLoopNumbers() - Method in class org.youscope.common.ExecutionInformation: Some jobs may execute their child jobs more than once per execution, in some kind of loop.
getLowerAdjustmentCuttoff() - Method in class org.youscope.uielements.HistogramPlot: Returns the percentage of pixels (0 <= lowerAdjustmentCuttoff < 1) which is set in the auto-adjustment to be black.
getLowerLimit() - Method in interface org.youscope.addon.microscopeaccess.FloatPropertyInternal: Returns the lower limit of this value.
getLowerLimit() - Method in interface org.youscope.addon.microscopeaccess.IntegerPropertyInternal: Returns the lower limit of this value.
getLowerLimit() - Method in interface org.youscope.common.microscope.FloatProperty: Returns the lower limit of this value.
getLowerLimit() - Method in interface org.youscope.common.microscope.IntegerProperty: Returns the lower limit of this value.
getMainProgram() - Static method in class org.youscope.client.YouScopeClientImpl: Returns the main window.
getMainProgram() - Static method in class org.youscope.server.YouScopeServerImpl: Returns the one and only object of this class.
getMainProgram() - Static method in class org.youscope.starter.Starter: Returns the only object of this class.
getMajorVersion() - Method in class org.youscope.common.YouScopeVersion
getMaskFileName() - Method in interface org.youscope.plugin.slimjob.SlimJob: Returns the file name of the mask which should be used to define foreground and background.
getMaskFileName() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration: Returns the file name of the mask which should be used to define foreground and background.
getMaskX() - Method in interface org.youscope.plugin.slimjob.SlimJob: Returns the X position of the center of the inner and outer circle (the "donut").
getMaskX() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration: Returns the X position of the center of the inner and outer circle (the "donut").
getMaskY() - Method in interface org.youscope.plugin.slimjob.SlimJob: Returns the Y position of the center of the inner and outer circle (the "donut").
getMaskY() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration: Returns the Y position of the center of the inner and outer circle (the "donut").
getMaxCellDiameter() - Method in class org.youscope.plugin.quickdetect.QuickDetectConfiguration: Returns the maximal diameter in pixels a cell must have.
getMaxDeltaFlowRate() - Method in class org.youscope.plugin.dropletmicrofluidics.evaporationController.EvaporationControllerConfiguration: Maximal flow rate in ul/min for the correction of drolet height.
getMaxDeltaFlowRate() - Method in class org.youscope.plugin.dropletmicrofluidics.tablecontroller.TableControllerConfiguration: Maximal flow rate in ul/min for the correction of drolet height.
getMaximalPixelValue(BufferedImage) - Static method in class org.youscope.common.util.ImageTools: Returns the maximal intensity a pixel in the image can have.
getMaxIntensity() - Method in class org.youscope.common.image.ImageEvent: Returns the maximal intensity a pixel can have.
getMaxNumLines() - Method in class org.youscope.client.uielements.DefaultQuickLoggerModel
getMaxNumLines() - Method in interface org.youscope.client.uielements.QuickLoggerModel: Returns the maximal number of stored lines.
getMaxSearchSteps() - Method in class org.youscope.plugin.brentfocussearch.BrentFocusSearchConfiguration: Returns the maximal number of images which should be taken and analyzed to find the optional focal plane
getMaxValue() - Method in class org.youscope.plugin.oscillatinginput.OscillatingDeviceJobConfiguration
getMeanOffset() - Method in class org.youscope.addon.dropletmicrofluidics.DropletObserverResult: Returns the mean droplet offset.
getMeasuredPositionsInWell() - Method in class org.youscope.plugin.microplatemeasurement.MicroplatePositionConfiguration: Returns a matrix of the size of the positions in a well, where each element is indicating if the respective position should be measured or not.
getMeasuredWells() - Method in class org.youscope.plugin.microplatemeasurement.MicroplatePositionConfiguration: Returns a matrix of the size of the microplate, where each element is indicating if the respective well should be measured or not.
getMeasurementBasePath(String, long) - Method in interface org.youscope.common.saving.SaveSettings: Returns the name of the base folder/path where the measurement is saved, and relative to which all other paths are given.
getMeasurementBasePath(String, long) - Method in class org.youscope.plugin.standardsavesettings.StandardSaveSettings
getMeasurementConfigurationFilePath() - Method in interface org.youscope.common.saving.SaveSettings: Path of the file (with extension) where the measurement configuration should be saved into.
getMeasurementConfigurationFilePath() - Method in class org.youscope.plugin.standardsavesettings.StandardSaveSettings
getMeasurementProvider() - Method in class org.youscope.server.YouScopeServerImpl
getMeasurementProvider() - Method in interface org.youscope.serverinterfaces.YouScopeServer: Returns a provider for the construction of new measurements.
getMeasurementQueue() - Method in class org.youscope.server.YouScopeServerImpl
getMeasurementQueue() - Method in interface org.youscope.serverinterfaces.YouScopeServer: Returns the currently queued measurements.
getMeasurementRuntime() - Method in class org.youscope.common.ExecutionInformation: Returns the time in ms of how long the current measurement is already running.
getMeasurementRuntime() - Method in class org.youscope.common.measurement.MeasurementConfiguration
getMeasurementSaver() - Method in interface org.youscope.serverinterfaces.ConstructionContext: Returns functionality to save images, tables and similar produced by a measurement component to hard disk.
getMeasurementStartTime() - Method in class org.youscope.common.ExecutionInformation: Returns the absolute time when the measurement was started, in number of milliseconds since January 1, 1970, 00:00:00 GMT.
getMeasurementUUID() - Method in class org.youscope.common.measurement.SimpleMeasurementContext
getMeasurementUUID() - Method in interface org.youscope.common.MeasurementContext: Returns the unique identifier of the measurement containing this component.
getMessage() - Method in interface org.youscope.plugin.waitforuser.WaitForUserJob: Returns the message displayed to the user.
getMessage() - Method in class org.youscope.plugin.waitforuser.WaitForUserJobConfiguration: Returns the message which is displayed to the user.
getMetadata() - Method in interface org.youscope.addon.skin.Skin: Returns the metadata (like human readable name) for the look and feel.
getMetadata(String) - Method in interface org.youscope.addon.skin.SkinFactory: Returns the metadata (like human readable name) for a given skin.
getMetadata(String) - Method in class org.youscope.addon.skin.SkinFactoryAdapter
getMetadata() - Static method in class org.youscope.template.tool.TemplateTool: Returns the metadata of this tool.
getMethodCallSyntax(String, String, String...) - Method in class org.youscope.plugin.matlabscripting.MatlabScriptEngineFactory
getMicrofluidicChipID() - Method in class org.youscope.plugin.dropletmicrofluidics.defaultobserver.DefaultObserverConfiguration: Returns the ID of the chip for which this observer observes the droplet height.
getMicroplateID() - Method in interface org.youscope.common.measurement.microplate.Microplate: Returns the ID of this microplate type.
getMicroplateID() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS1536MicroplateType
getMicroplateID() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS384MicroplateType
getMicroplateID() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS96MicroplateType
getMicroplateID() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC12MicroplateType
getMicroplateID() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC24MicroplateType
getMicroplateID() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC6MicroplateType
getMicroplateName() - Method in interface org.youscope.common.measurement.microplate.Microplate: Should return a short human readable name of this microplate type.
getMicroplateName() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS1536MicroplateType
getMicroplateName() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS384MicroplateType
getMicroplateName() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS96MicroplateType
getMicroplateName() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC12MicroplateType
getMicroplateName() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC24MicroplateType
getMicroplateName() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC6MicroplateType
getMicroplatePositions() - Method in class org.youscope.plugin.microplatejob.MicroplateJobConfiguration: Returns the used microplate and the measured positions therein.
getMicroplatePositions() - Method in class org.youscope.plugin.microplatemeasurement.MicroplateMeasurementConfiguration: Returns the used microplate and the measured positions therein.
getMicroplateType(String) - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns the microplate type with the given type identifer.
getMicroplateTypeID() - Method in class org.youscope.common.measurement.microplate.MicroplateConfiguration: Returns the type ID of the microplate, or NULL if the microplate does not correspond to a predefined type.
getMicroplateTypeIdentifiers() - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns the type identifiers of all known microplate types.
getMicroplateTypes() - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns all known microplate types.
getMicroplateTypes() - Static method in class org.youscope.plugin.custommicroplates.CustomMicroplatesManager: Returns a list of all custom (using this addon) defined microplate types.
getMicroscope() - Method in class org.youscope.addon.AddonUIAdapter: Returns the microscope.
getMicroscope() - Method in class org.youscope.server.YouScopeServerImpl
getMicroscope() - Method in interface org.youscope.serverinterfaces.YouScopeServer: Returns an object allowing the access to the microscope.
getMicroscopeConfiguration() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns an interface with which general configuration settings of the microscope can be changed.
getMicroscopeConfiguration() - Method in interface org.youscope.common.microscope.Microscope: Returns an interface with which general configuration settings of the microscope can be changed.
getMicroscopeConfigurationFilePath() - Method in interface org.youscope.common.saving.SaveSettings: Path of the file (with extension) where the microscope configuration should be saved into.
getMicroscopeConfigurationFilePath() - Method in class org.youscope.plugin.standardsavesettings.StandardSaveSettings
getMicroscopeConnectionDescription(String) - Method in interface org.youscope.addon.microscopeaccess.MicroscopeConnectionFactory: Returns a human readable description of the plug-in.
getMicroscopeConnectionDescription(String) - Method in class org.youscope.plugin.microscopeaccess.MicroscopeConnectionFactoryImpl
getMicroscopeImage(ImageEvent<?>, BufferedImage) - Static method in class org.youscope.common.util.ImageTools: Creates an image from microscope supplied data, and saves it in the provided image.
getMicroscopeImage(ImageEvent<?>) - Static method in class org.youscope.common.util.ImageTools: Creates an image from microscope supplied data.
getMimeTypes() - Method in class org.youscope.plugin.matlabscripting.MatlabScriptEngineFactory
getMinCellDiameter() - Method in class org.youscope.plugin.quickdetect.QuickDetectConfiguration: Returns the minimal diameter in pixels a cell must have.
getMinimalTimeMS() - Method in interface org.youscope.plugin.lifecelldetection.CellDetectionJob: Returns the minimal time (in ms) the execution of the job should take.
getMinimalTimeMS() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionJobConfiguration: Returns the minimal time (in ms) the execution of the job should take.
getMinMax() - Method in class org.youscope.uielements.HistogramPlot: Returns an array with two elements, where the first element is the selected minimum and the second the selected maximum.
getMinValue() - Method in class org.youscope.plugin.oscillatinginput.OscillatingDeviceJobConfiguration
getModel() - Method in class org.youscope.client.uielements.QuickLogger: Returns the model of the quick logger.
getMultiPosDeviceSettings() - Method in class org.youscope.plugin.deviceslides.DeviceSlidesJobConfiguration: Returns the multi-position device settings.
getName() - Method in class org.youscope.addon.component.generic.Property: Returns the (human readable) name of the property.
getName() - Method in interface org.youscope.addon.pathoptimizer.PathOptimizer: Returns a human readable short name of the optimizer.
getName() - Method in interface org.youscope.common.Component: Returns a name of the component meant for human interpretation.
getName() - Method in class org.youscope.common.job.JobAdapter
getName() - Method in class org.youscope.common.measurement.MeasurementConfiguration
getName() - Method in class org.youscope.common.resource.ResourceAdapter
getName() - Method in class org.youscope.plugin.fullmicroplatepath.FullMicroplateOptimizer
getName() - Method in class org.youscope.plugin.nonoptimizedpath.NonOptimizedOptimizer
getName() - Method in class org.youscope.plugin.zigzagpath.ZigZagPathOptimizer
getNames() - Method in class org.youscope.plugin.matlabscripting.MatlabScriptEngineFactory
getNemesysDevice() - Method in class org.youscope.plugin.dropletmicrofluidics.DropletMicrofluidicJobConfiguration: Returns the name of the Nemesys device.
getNemesysDevice() - Method in class org.youscope.plugin.nemesys.NemesysJobConfiguration: Returns the ID of the Nemesys device which should be controlled, or null if yet not set.
getNemesysDeviceName() - Method in interface org.youscope.plugin.nemesys.NemesysJob: Returns the name of the Nemesys device.
getNewImagePixels(int) - Method in interface org.youscope.common.scripting.ScriptImageStorage: Waits for new image data to arrive and returns the pixels of the newly arrived image.
getNewLineConstraint() - Static method in class org.youscope.uielements.StandardFormats: Returns a constraint which can be e.g.
getNumberOfDosingUnits() - Method in interface org.youscope.plugin.nemesys.NemesysScriptCallback: Returns the number of dosing units/syringes attached to the Nemesys device.
getNumberOfFlowUnits() - Method in interface org.youscope.plugin.fluigent.FluigentScriptCallback: Returns the number of flow units attached to the Fluigent device.
getNumberOfImages() - Method in interface org.youscope.common.image.ImageProducer: Returns the number of images which get produced per evaluation of the respective job.
getNumberOfImages() - Method in interface org.youscope.common.image.ImageProducerConfiguration: Returns the number of images which get produced per evaluation of a job initialized with this configuration.
getNumberOfImages() - Method in class org.youscope.plugin.autofocus.AutoFocusJobConfiguration
getNumberOfImages() - Method in class org.youscope.plugin.composedimaging.ComposedImagingJobConfiguration
getNumberOfImages() - Method in class org.youscope.plugin.continousimaging.ContinuousImagingJobConfiguration
getNumberOfImages() - Method in class org.youscope.plugin.continousimaging.ShortContinuousImagingJobConfiguration
getNumberOfImages() - Method in class org.youscope.plugin.glowvisualizer.GlowVisualizerConfiguration
getNumberOfImages() - Method in class org.youscope.plugin.imagingjob.ImagingJobConfiguration
getNumberOfImages() - Method in class org.youscope.plugin.labelvisualizer.LabelVisualizerConfiguration
getNumberOfImages() - Method in class org.youscope.plugin.multicamerajob.ParallelImagingJobConfiguration
getNumberOfImages() - Method in class org.youscope.plugin.outoffocus.OutOfFocusJobConfiguration
getNumberOfImages() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration
getNumChoices() - Method in class org.youscope.uielements.ComponentComboBox: Returns the number of choices the user has.
getNumColumns() - Method in interface org.youscope.common.table.RowView: Returns the number of entries (i.e.
getNumColumns() - Method in class org.youscope.common.table.Table: Returns the number of columns in this table.
getNumColumns() - Method in class org.youscope.common.table.TableDefinition: Returns the number of defined columns.
getNumColumns() - Method in class org.youscope.common.table.TemporaryRow
getNumControls() - Method in class org.youscope.uielements.ImagePanel: Returns the number of controls in the menu containing all controls.
getNumDroplets() - Method in class org.youscope.addon.dropletmicrofluidics.DropletObserverResult: Returns the number of droplets.
getNumExecutions() - Method in class org.youscope.common.task.PeriodConfiguration
getNumFlowUnits() - Method in class org.youscope.addon.dropletmicrofluidics.DropletControllerResult: Returns the number of flow units.
getNumImages() - Method in interface org.youscope.plugin.continousimaging.ShortContinuousImagingJob: Returns the number of images which should be taken.
getNumImages() - Method in class org.youscope.plugin.continousimaging.ShortContinuousImagingJobConfiguration: Returns the number of images which should be taken.
getNumInputColumns() - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the number of columns in the input data table.
getNumInputRows() - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the number of rows in the input data table.
getNumIterationsBreak() - Method in class org.youscope.plugin.composedimaging.StaggeringJobConfiguration: Returns the number of iterations for which nothing should be done before imaging in the next iteration the defined number of tiles.
getNumJobs() - Method in class org.youscope.common.job.EditableJobContainerAdapter
getNumJobs() - Method in interface org.youscope.common.job.JobContainer: Returns the number of jobs in this container.
getNumLines() - Method in class org.youscope.client.uielements.DefaultQuickLoggerModel
getNumLines() - Method in interface org.youscope.client.uielements.QuickLoggerModel: Returns current number of stored lines.
getNumMeasuredPos() - Method in class org.youscope.plugin.microplatemeasurement.MicroplatePositionConfiguration: Returns the number of positions in a well which are measured.
getNumMeasuredWells() - Method in class org.youscope.plugin.microplatemeasurement.MicroplatePositionConfiguration: Returns the number of wells which are measured in the microplate.
getNumOutputColumns() - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the number of columns in the output data table.
getNumPages() - Method in class org.youscope.addon.measurement.MeasurementAddonUIAdapter: Returns the number of pages.
getNumPixels() - Method in class org.youscope.plugin.composedimaging.ComposedImagingJobConfiguration
getNumPixels() - Method in class org.youscope.plugin.composedimaging.ComposedImagingMeasurementConfiguration: Returns the number of pixels in one image.
getNumPositions() - Method in class org.youscope.common.measurement.microplate.MicroplateConfiguration: Microplate measurements can be "misused" to measure just some arbitrary positions.
getNumPositions() - Method in class org.youscope.common.PositionInformation: Returns the number of logical position types the job is executed in.
getNumRepeats() - Method in interface org.youscope.plugin.repeatjob.RepeatJob: Returns the number of times the sub-jobs should be repeated each time the repeat-job is executed.
getNumRepeats() - Method in class org.youscope.plugin.repeatjob.RepeatJobConfiguration: Returns the number of times the sub-jobs should be repeated each time the repeat-job is executed.
getNumRows() - Method in interface org.youscope.common.table.ColumnView: Returns the number of entries (i.e.
getNumRows() - Method in class org.youscope.common.table.Table: Returns the number of rows in this table.
getNumSearchSteps() - Method in class org.youscope.plugin.exhaustivefocussearch.ExhaustiveFocusSearchConfiguration: Returns the number of images which should be taken and analyzed to find the optional focal plane
getNumStates() - Method in interface org.youscope.addon.microscopeaccess.StateDeviceInternal: Returns the number of states.
getNumStates() - Method in interface org.youscope.common.microscope.StateDevice: Returns the number of states.
getNumTasks() - Method in interface org.youscope.common.task.TaskContainerConfiguration: Returns the number of tasks in the container.
getNumTasks() - Method in class org.youscope.plugin.taskmeasurement.TaskMeasurementConfiguration
getNumTiles() - Method in interface org.youscope.plugin.composedimaging.PlateScanningJob: Returns the number of tiles/sub-images.
getNumTiles() - Method in interface org.youscope.plugin.composedimaging.StaggeringJob: Returns the number of tiles/sub-images.
getNumTilesPerIteration() - Method in class org.youscope.plugin.composedimaging.StaggeringJobConfiguration: Returns the number of tiles which should be imaged per iteration.
getNumTilesX() - Method in class org.youscope.plugin.composedimaging.PlateScanningJobConfiguration
getNumTilesX() - Method in class org.youscope.plugin.composedimaging.StaggeringJobConfiguration
getNumTilesY() - Method in class org.youscope.plugin.composedimaging.PlateScanningJobConfiguration
getNumTilesY() - Method in class org.youscope.plugin.composedimaging.StaggeringJobConfiguration
getNumWellsX() - Method in interface org.youscope.common.measurement.microplate.Microplate: Returns the number of wells in the x-direction.
getNumWellsX() - Method in class org.youscope.common.measurement.microplate.MicroplateConfiguration: Returns the number of wells in the x-direction.
getNumWellsX() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS1536MicroplateType
getNumWellsX() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS384MicroplateType
getNumWellsX() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS96MicroplateType
getNumWellsX() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC12MicroplateType
getNumWellsX() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC24MicroplateType
getNumWellsX() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC6MicroplateType
getNumWellsY() - Method in interface org.youscope.common.measurement.microplate.Microplate: Returns the number of wells in the y-direction.
getNumWellsY() - Method in class org.youscope.common.measurement.microplate.MicroplateConfiguration: Returns the number of wells in the y-direction.
getNumWellsY() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS1536MicroplateType
getNumWellsY() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS384MicroplateType
getNumWellsY() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS96MicroplateType
getNumWellsY() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC12MicroplateType
getNumWellsY() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC24MicroplateType
getNumWellsY() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC6MicroplateType
getNx() - Method in class org.youscope.plugin.composedimaging.ComposedImagingJobConfiguration
getNx() - Method in class org.youscope.plugin.composedimaging.ComposedImagingMeasurementConfiguration: Returns the number of images which should be made in the x-direction.
getNy() - Method in class org.youscope.plugin.composedimaging.ComposedImagingJobConfiguration
getNy() - Method in class org.youscope.plugin.composedimaging.ComposedImagingMeasurementConfiguration: Returns the number of images which should be made in the y-direction.
getObserver() - Method in interface org.youscope.plugin.dropletmicrofluidics.DropletMicrofluidicJob: Returns the observer algorithm used to estimate the droplet heights from periodical autofocus measurements.
getObserverConfiguration() - Method in class org.youscope.plugin.dropletmicrofluidics.DropletMicrofluidicJobConfiguration: Returns the configuration of the observer of the droplet heights.
getObserverIndividual() - Method in class org.youscope.plugin.dropletmicrofluidics.defaultobserver.DefaultObserverConfiguration: Returns learn rate constant of individual droplet heights.
getObserverMean() - Method in class org.youscope.plugin.dropletmicrofluidics.defaultobserver.DefaultObserverConfiguration: Returns learn rate constant of mean droplet heights.
getOffset() - Method in interface org.youscope.addon.microscopeaccess.AutoFocusDeviceInternal: Returns the current offset.
getOffset() - Method in interface org.youscope.common.microscope.AutoFocusDevice: Returns the current offset.
getOffset() - Method in interface org.youscope.plugin.outoffocus.OutOfFocusJob: Gets the offset of the focus device.
getOnixProtocol() - Method in interface org.youscope.plugin.onix.OnixJob: Returns the onix protocol.
getOnixProtocol() - Method in class org.youscope.plugin.onix.OnixJobConfiguration: Returns the onix protocol.
getOptimizerID() - Method in interface org.youscope.addon.pathoptimizer.PathOptimizer: Returns the ID of this optimizer.
getOptimizerID() - Method in class org.youscope.plugin.fullmicroplatepath.FullMicroplateOptimizer
getOptimizerID() - Method in class org.youscope.plugin.nonoptimizedpath.NonOptimizedOptimizer
getOptimizerID() - Method in class org.youscope.plugin.zigzagpath.ZigZagPathOptimizer
getOS() - Method in class org.youscope.common.YouScopeVersion
getOuterRadius() - Method in interface org.youscope.plugin.slimjob.SlimJob: Returns the radius of the outer circle (the "donut").
getOuterRadius() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration: Returns the radius of the outer circle (the "donut").
getOutputJob() - Method in interface org.youscope.plugin.controller.ControllerJob: Returns the job which is used to consume the output of the controller.
getOutputJob() - Method in class org.youscope.plugin.controller.ControllerJobConfiguration: Returns the job which is used to consume the output of the controller.
getOutputJob() - Method in interface org.youscope.plugin.dropletmicrofluidics.DropletMicrofluidicJob: Returns the nemesys job which is used as the output.
getOutputStatement(String) - Method in class org.youscope.plugin.matlabscripting.MatlabScriptEngineFactory
getOverlap() - Method in class org.youscope.plugin.composedimaging.ComposedImagingJobConfiguration
getOverlap() - Method in class org.youscope.plugin.composedimaging.ComposedImagingMeasurementConfiguration: Returns the overlap (0.0-1.0) of the two neighboring images.
getPageName() - Method in class org.youscope.addon.measurement.MeasurementAddonUIPage: Returns a short name/description what the page does.
getPageName() - Method in class org.youscope.addon.measurement.pages.DescriptionPage
getPageName() - Method in class org.youscope.addon.measurement.pages.GeneralSettingsPage
getPageName() - Method in class org.youscope.addon.measurement.pages.StartAndEndSettingsPage
getPageName() - Method in class org.youscope.plugin.microplatejob.JobConfigurationPage: Returns a short name/description what the page does.
getParameter(String) - Method in class org.youscope.plugin.matlabscripting.MatlabScriptEngineFactory
getPath(MicroplatePositionConfiguration) - Method in interface org.youscope.addon.pathoptimizer.PathOptimizer: Returns the optimized path for a given position configuration, or zero if not applicable.
getPath(MicroplatePositionConfiguration) - Method in class org.youscope.plugin.fullmicroplatepath.FullMicroplateOptimizer
getPath(MicroplatePositionConfiguration) - Method in class org.youscope.plugin.nonoptimizedpath.NonOptimizedOptimizer
getPath(MicroplatePositionConfiguration) - Method in class org.youscope.plugin.zigzagpath.ZigZagPathOptimizer
getPathOptimizerID() - Method in class org.youscope.plugin.microplatejob.MicroplateJobConfiguration: Returns the ID of the optimizer which should be used to minimize the distances between two wells/positions measured.
getPathOptimizerID() - Method in class org.youscope.plugin.microplatemeasurement.MicroplateMeasurementConfiguration: Returns the ID of the optimizer which should be used to minimize the distances between two wells/positions measured.
getPeriod() - Method in class org.youscope.common.task.RegularPeriodConfiguration
getPeriod() - Method in class org.youscope.common.task.TaskConfiguration
getPeriod() - Method in class org.youscope.plugin.composedimaging.ComposedImagingMeasurementConfiguration
getPeriod() - Method in class org.youscope.plugin.microplatemeasurement.MicroplateMeasurementConfiguration
getPeriod() - Method in class org.youscope.plugin.simplemeasurement.SimpleMeasurementConfiguration
getPeriod() - Method in class org.youscope.uielements.PeriodVaryingPanel: Returns the period configuration.
getPeriodLength() - Method in class org.youscope.plugin.oscillatinginput.OscillatingDeviceJobConfiguration
getPeriods() - Method in class org.youscope.common.task.VaryingPeriodConfiguration: Returns the periods.
getPhaseShiftMask(int) - Method in interface org.youscope.plugin.slimjob.SlimJob: Returns the phase shift of the mask (the donut) for the maskID mask.
getPhaseShiftMask(int) - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration: Returns the phase shift of the mask (the donut) for the maskID mask.
getPhaseShiftOutside() - Method in interface org.youscope.plugin.slimjob.SlimJob: Returns the phase shift outside of the mask (background of donut).
getPhaseShiftOutside() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration: Returns the phase shift outside of the mask (background of donut).
getPixelSize() - Method in interface org.youscope.common.microscope.PixelSize: Returns the pixel size in micro meters.
getPixelSize(String) - Method in interface org.youscope.common.microscope.PixelSizeManager: Returns the pixel size with the given ID.
getPixelSize() - Method in class org.youscope.plugin.composedimaging.ComposedImagingJobConfiguration
getPixelSize() - Method in class org.youscope.plugin.composedimaging.ComposedImagingMeasurementConfiguration: Returns the size of one pixel in micro meters.
getPixelSizeID() - Method in interface org.youscope.common.microscope.PixelSize: Returns the ID of the pixel size setting.
getPixelSizeID() - Method in class org.youscope.plugin.composedimaging.ComposedImagingJobConfiguration: Returns the ID of the pixel size setting, or null if the pixel size does not correspond to a predefined pixel size setting.
getPixelSizeID() - Method in class org.youscope.plugin.composedimaging.ComposedImagingMeasurementConfiguration: Returns the ID of the pixel size setting, or null if the pixel size does not correspond to a predefined pixel size setting.
getPixelSizeManager() - Method in interface org.youscope.common.microscope.Microscope: Returns an interface with which the pixel size for different microscope settings can be queried and set.
getPixelSizes() - Method in interface org.youscope.common.microscope.PixelSizeManager: Returns a list of all available pixel sizes.
getPixelSizeSettings() - Method in interface org.youscope.common.microscope.PixelSize: Returns all device settings corresponding to this pixel size.
getPixelValue(ImageEvent<?>, int, int) - Static method in class org.youscope.common.util.ImageTools: Returns the intensity of the pixel at the (zero based) x and y position in original coordinates.
getPixelValue(BufferedImage, int, int) - Static method in class org.youscope.common.util.ImageTools: Returns the intensity of the pixel at the (zero based) x and y position in original coordinates.
getPosition() - Method in interface org.youscope.addon.microscopeaccess.StageDeviceInternal: Returns the current position of the plate.
getPosition() - Method in interface org.youscope.common.job.basicjobs.FocusingJob: Gets the position/offset of the focus/autofocus device.
getPosition() - Method in interface org.youscope.common.microscope.StageDevice: Returns the current position of the plate.
getPosition(int) - Method in class org.youscope.common.PositionInformation: Returns the n-th logical position the job is executed in.
getPosition() - Method in class org.youscope.plugin.focusingjob.FocusingJobConfiguration
getPosition(Well, int, int) - Method in class org.youscope.plugin.microplatemeasurement.MicroplatePositionConfiguration: Returns the previously initialized x, y, and focus value for the given position in the given well, or NULL if the data was yet not initialized or the given position or the given well should not be measured.
getPosition() - Method in class org.youscope.plugin.outoffocus.OutOfFocusJobConfiguration
getPositionInformation() - Method in interface org.youscope.common.Component: Returns the component's position information, e.g.
getPositionInformation() - Method in class org.youscope.common.image.ImageEvent: Returns the information about the logical position this image was made in.
getPositionInformation() - Method in class org.youscope.common.job.JobAdapter
getPositionInformation() - Method in class org.youscope.common.resource.ResourceAdapter
getPositionInformation() - Method in class org.youscope.common.table.Table: Returns the logical position information in the measurement where this table was created.
getPositions() - Method in class org.youscope.common.PositionInformation: Returns all logical positions the job is in as an array, where the first element represents the outermost and the last the innermost position.
getPositionsString() - Method in class org.youscope.common.PositionInformation: Returns a string with the position informations, separated by dashes.
getPositionString(int) - Method in class org.youscope.common.PositionInformation: Returns a string representation composed of the position type and the position.
getPositionType(int) - Method in class org.youscope.common.PositionInformation: Returns the n-th logical position type the job is executed in.
getPositionTypes() - Method in class org.youscope.common.PositionInformation: Returns the types of positioning the logical positions of the job describe as an array, where the first element represents the outermost and the last the innermost position.
getPositionX() - Method in class org.youscope.addon.pathoptimizer.PathOptimizerPosition: Returns the position in well column number.
getPositionY() - Method in class org.youscope.addon.pathoptimizer.PathOptimizerPosition: Returns the position in well row number.
getPostProcessorMetadata(String) - Method in interface org.youscope.addon.postprocessing.PostProcessorAddonFactory: Returns the metadata (like human readable name) for a given post processor type identifier.
getPostProcessorMetadata() - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns the metadata of all post processors.
getPostProcessorMetadata(String) - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns the metadata of the post processor having the given type identifier
getPostProcessorMetadata(String) - Method in class org.youscope.plugin.cellx.OpenCellXFactory
getPostProcessorMetadata(String) - Method in class org.youscope.plugin.measurementviewer.MeasurementViewerPostProcessingFactory
getPostProcessorMetadata(String) - Method in class org.youscope.plugin.openbis.OpenBISUploaderFactory
getPostProcessorMetadata(String) - Method in class org.youscope.plugin.openmeasurementfolder.OpenMeasurementFolderFactory
getPostProcessorTypeIdentifiers() - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns the type identifiers of all post processors.
getPreferredSize() - Method in class org.youscope.addon.AddonUIAdapter: Returns the preferred size of this UI element, or null if size should be calculated automatically.
getPreferredSize(JComponent) - Method in class org.youscope.client.uielements.plaf.BasicQuickLoggerUI
getPreferredSize() - Method in class org.youscope.plugin.standardsavesettings.FileNameComboBox
getProducedTableDefinition() - Method in interface org.youscope.common.table.TableProducer: Returns the definition of the table layout of the tables produced by this producer, e.g.
getProducedTableDefinition() - Method in interface org.youscope.common.table.TableProducerConfiguration: Returns the definition of the table layout of the tables produced by this producer, e.g.
getProducedTableDefinition() - Method in class org.youscope.plugin.autofocus.AutoFocusJobConfiguration
getProducedTableDefinition() - Method in class org.youscope.plugin.cellx.CellXConfiguration
getProducedTableDefinition() - Method in class org.youscope.plugin.controller.ControllerJobConfiguration
getProducedTableDefinition() - Method in class org.youscope.plugin.dropletmicrofluidics.DropletMicrofluidicJobConfiguration
getProducedTableDefinition() - Method in class org.youscope.plugin.fluigent.FluigentJobConfiguration
getProducedTableDefinition() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionJobConfiguration
getProducedTableDefinition() - Method in class org.youscope.plugin.nemesys.NemesysJobConfiguration
getProducedTableDefinition() - Method in class org.youscope.plugin.quickdetect.QuickDetectConfiguration
getProducedTableDefinition() - Method in class org.youscope.plugin.statistics.StatisticsJobConfiguration
getProgram(String...) - Method in class org.youscope.plugin.matlabscripting.MatlabScriptEngineFactory
getProperties() - Method in interface org.youscope.addon.microscopeaccess.DeviceInternal: Returns a list of all properties of this device.
getProperties() - Method in interface org.youscope.clientinterfaces.YouScopeClient: Returns an interface through which an addon can save properties as well as access the properties of the YouScope client.
getProperties() - Method in interface org.youscope.common.microscope.Device: Returns a list of all properties of this device.
getProperties() - Method in class org.youscope.server.YouScopeServerImpl
getProperties() - Method in interface org.youscope.serverinterfaces.YouScopeServer: Returns the properties of the server.
getProperty() - Method in class org.youscope.addon.component.generic.PropertyEditorAdapter
getProperty(String) - Method in interface org.youscope.addon.microscopeaccess.DeviceInternal: Returns the property of this device with the given name, or null if this device does not have a property with this name.
getProperty(String, String) - Method in interface org.youscope.clientinterfaces.YouScopeProperties: Returns the property with the given name, or default value if the property is not yet set or set invalidly.
getProperty(StandardProperty) - Method in interface org.youscope.clientinterfaces.YouScopeProperties: Returns the current value of the standard property.
getProperty(String, int) - Method in interface org.youscope.clientinterfaces.YouScopeProperties: Returns the property with the given name, or default value if the property is not yet set or set invalidly.
getProperty(String, double) - Method in interface org.youscope.clientinterfaces.YouScopeProperties: Returns the property with the given name, or default value if the property is not yet set or set invalidly.
getProperty(String, boolean) - Method in interface org.youscope.clientinterfaces.YouScopeProperties: Returns the property with the given name, or default value if the property is not yet set or set invalidly.
getProperty(String, String[]) - Method in interface org.youscope.clientinterfaces.YouScopeProperties: Returns the property with the given name, or default value if the property is not yet set or set invalidly.
getProperty(String) - Method in class org.youscope.common.measurement.SimpleMeasurementContext
getProperty(String, Class<T>) - Method in class org.youscope.common.measurement.SimpleMeasurementContext
getProperty(String) - Method in interface org.youscope.common.MeasurementContext: Returns a previously-by this or another measurement component-stored property.
getProperty(String, Class<T>) - Method in interface org.youscope.common.MeasurementContext: Returns a previously-by this or another measurement component-stored property.
getProperty(String) - Method in interface org.youscope.common.microscope.Device: Returns the property of this device with the given name, or null if this device does not have a property with this name.
getProperty() - Method in class org.youscope.common.microscope.DeviceSetting: Returns the property of the device which should be changed.
getProperty() - Method in class org.youscope.plugin.oscillatinginput.OscillatingDeviceJobConfiguration
getPropertyID() - Method in interface org.youscope.addon.microscopeaccess.PreInitDevicePropertyInternal: Returns the name of the device property.
getPropertyID() - Method in interface org.youscope.addon.microscopeaccess.PropertyInternal: Returns the name of the device property.
getPropertyID() - Method in interface org.youscope.common.microscope.PreInitDeviceProperty: Returns the name of the device property.
getPropertyID() - Method in interface org.youscope.common.microscope.Property: Returns the name of the device property.
getPropertyID() - Method in class org.youscope.plugin.microscopeaccess.PropertyImpl
getPropertyIdentifiers() - Method in class org.youscope.common.measurement.SimpleMeasurementContext
getPropertyIdentifiers() - Method in interface org.youscope.common.MeasurementContext: Returns the identifiers of all stored properties.
getPropertyName() - Method in enum org.youscope.clientinterfaces.StandardProperty: Returns the name of the property.
getProxy() - Method in class org.youscope.plugin.matlabscripting.RemoteMatlabProxyFactory: Calling this method will get a RemoteMatlabProxy.
getRatioHeightToVolume() - Method in class org.youscope.plugin.dropletmicrofluidics.evaporationController.EvaporationControllerConfiguration: Returns the (estimated) ratio between droplet height in um and the droplet volume in ul.
getRatioHeightToVolume() - Method in class org.youscope.plugin.dropletmicrofluidics.flexiblecontroller.FlexibleControllerConfiguration: Returns the (estimated) ratio between droplet height in um and the droplet volume in ul.
getRatioHeightToVolume() - Method in class org.youscope.plugin.dropletmicrofluidics.tablecontroller.TableControllerConfiguration: Returns the (estimated) ratio between droplet height in um and the droplet volume in ul.
getRawText() - Method in class org.youscope.uielements.LinkLabel: Returns the unmodified text.
getRedoPresentationName() - Method in class org.youscope.uielements.scripteditor.ScriptEditor: Returns a description of the action which can be redone, if available.
getReflectorDevice() - Method in interface org.youscope.plugin.slimjob.SlimJob: Returns the name of the reflector device which should be used to generate the pattern.
getReflectorDevice() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration: Returns the name of the reflector device which should be used to generate the pattern.
getRelativeValue() - Method in class org.youscope.uielements.ImagePanel.PixelInfo: Gets relative intensity of the pixel, where 0 is black and 1 is white.
getResourceIcon(String, String) - Static method in class org.youscope.uielements.ImageLoadingTools: Returns the icon from the given path, initialized with the given description.
getRevision() - Method in class org.youscope.common.YouScopeVersion
getRowCount() - Method in class org.youscope.uielements.CellSelectionTable.CellSelectionTableModel
getRowName(int) - Method in interface org.youscope.uielements.CellSelectionTableConfiguration: Returns the name of the row with the given index.
getRowView(int) - Method in class org.youscope.common.table.Table: Returns a row view for the given row index.
getRuntime() - Method in interface org.youscope.common.measurement.Measurement: Returns the runtime of the measurement.
getSaveImageListener(String) - Method in interface org.youscope.common.saving.MeasurementSaver: Returns an image listener which can be added to an image producing job to save all produced images to the disk.
getSaveImages() - Method in class org.youscope.plugin.continousimaging.ContinousImagingMeasurementConfiguration: Returns if the images made by this job should be saved to disk.
getSaver() - Method in interface org.youscope.common.measurement.Measurement: Returns an interface which defines how (and if) the measurement should be saved.
getSaveSettings() - Method in class org.youscope.common.measurement.MeasurementConfiguration: Returns the definition how the measurement should be saved.
getSaveSettings() - Method in interface org.youscope.common.saving.MeasurementSaver: Returns the current settings how the measurement should be saved to the disk (e.g.
getSaveTableListener(String) - Method in interface org.youscope.common.saving.MeasurementSaver: Returns a table listener which can be added to an table data producing job to save all produced data to the disk.
getScaledImage(BufferedImage, float, float, BufferedImage) - Static method in class org.youscope.common.util.ImageTools: Returns a scaled version of the image.
getScaledMicroscopeImage(ImageEvent<?>, float, float) - Static method in class org.youscope.common.util.ImageTools: Creates an image from microscope supplied data.
getScaledMicroscopeImage(ImageEvent<?>, float, float, BufferedImage) - Static method in class org.youscope.common.util.ImageTools: Creates an image from microscope supplied data, and saves it in the provided image.
getScaledMicroscopeImage(ImageEvent<?>) - Static method in class org.youscope.common.util.ImageTools: Creates an image from microscope supplied data.
getScopeSettingsFilePath() - Method in interface org.youscope.common.saving.SaveSettings: Path of the XML file (with extension) where the scope and channel settings are saved into.
getScopeSettingsFilePath() - Method in class org.youscope.plugin.standardsavesettings.StandardSaveSettings
getScoreAlgorithm() - Method in class org.youscope.plugin.matlabfocusscores.MatlabScoresConfiguration
getScript() - Method in interface org.youscope.plugin.fluigent.FluigentJob: Returns the script which gets evaluated by the script engine every time the script runs.
getScript() - Method in class org.youscope.plugin.fluigent.FluigentJobConfiguration: Returns the script which controls the pumps, i.e.
getScript() - Method in interface org.youscope.plugin.nemesys.NemesysJob: Returns the script which gets evaluated by the script engine every time the script runs.
getScript() - Method in class org.youscope.plugin.nemesys.NemesysJobConfiguration: Returns the script which controls the syringes, i.e.
getScriptEngine() - Method in interface org.youscope.common.job.basicjobs.ScriptingJob: Returns the name of the script engine, or null, if script engine is not set.
getScriptEngine() - Method in interface org.youscope.plugin.fluigent.FluigentJob: Returns the name of the script engine, or null, if script engine is not set.
getScriptEngine() - Method in class org.youscope.plugin.fluigent.FluigentJobConfiguration: Returns the name of the script engine with which the script should be executed.
getScriptEngine() - Method in class org.youscope.plugin.matlabscripting.MatlabScriptEngineFactory
getScriptEngine() - Method in interface org.youscope.plugin.nemesys.NemesysJob: Returns the name of the script engine, or null, if script engine is not set.
getScriptEngine() - Method in class org.youscope.plugin.nemesys.NemesysJobConfiguration: Returns the name of the script engine with which the script should be executed.
getScriptEngine() - Method in class org.youscope.plugin.scriptingjob.ScriptingJobConfiguration
getScriptEngineFactories() - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns all script engine factories supported by the client.
getScriptEngineFactory(String) - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns a script engine factory with the given type identifier.
getScriptEngineManager() - Method in interface org.youscope.serverinterfaces.ConstructionContext: Returns a provider with which script engines can be created.
getScriptFile() - Method in interface org.youscope.common.job.basicjobs.ScriptingJob: Returns the file of the script which should be evaluated by the corresponding script engine.
getScriptFile() - Method in class org.youscope.plugin.scriptingjob.ScriptingJobConfiguration: Returns the file which should be executed by this script job (the file where the script is in).
getScriptingJob() - Method in interface org.youscope.common.scripting.ScriptInterface: Returns the currently executed scripting job.
getScriptLanguageNames() - Method in class org.youscope.common.scripting.JavaScriptStyle
getScriptLanguageNames() - Method in class org.youscope.common.scripting.MatlabScriptStyle
getScriptLanguageNames() - Method in interface org.youscope.common.scripting.ScriptStyle: Should return a list of the names of all scripting language implemented by the respective implementation (e.g.
getScriptLanguageNames() - Method in class org.youscope.plugin.onix.OnixScriptStyle
getScriptStyleID() - Method in class org.youscope.common.scripting.JavaScriptStyle
getScriptStyleID() - Method in class org.youscope.common.scripting.MatlabScriptStyle
getScriptStyleID() - Method in interface org.youscope.common.scripting.ScriptStyle: Should return a unique ID with which the script style implementation can be identified.
getScriptStyleID() - Method in class org.youscope.plugin.onix.OnixScriptStyle
getSegmentationImageSaveName() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionJobConfiguration: Returns the name under which the segmentation image should be saved.
getSelectedCellCount() - Method in class org.youscope.uielements.CellSelectionTable: Returns the number of selected cells
getSelectedCells() - Method in class org.youscope.uielements.CellSelectionTable: Returns a Matrix of booleans which represent the selected cells.
getSelectedElement() - Method in class org.youscope.uielements.ComponentComboBox: Returns the currently selected component, or null if no component is selected.
getSelectedTypeIdentifier() - Method in class org.youscope.uielements.ComponentComboBox: Returns the type identifier of the currently selected component, or null if no component is selected.
getServer() - Method in class org.youscope.addon.AddonUIAdapter: Returns the YouScope server.
getServer() - Method in class org.youscope.addon.component.generic.PropertyEditorAdapter
getServerAddon(Class<T>) - Method in interface org.youscope.serverinterfaces.YouScopeServerProperties: Returns a remote addon provider implementing the given interface.
getServerAddons(Class<T>) - Method in interface org.youscope.serverinterfaces.YouScopeServerProperties: Returns all remote addon providers implementing the given interface.
getSetter() - Method in class org.youscope.addon.component.generic.Property: Returns the setter method for this property.
getSettings() - Method in class org.youscope.uielements.DeviceSettingsPanel: Returns all initialized settings.
getShortMicroscopeConnectionDescription(String) - Method in interface org.youscope.addon.microscopeaccess.MicroscopeConnectionFactory: Returns a short (one line) human readable description of the plug-in.
getShortMicroscopeConnectionDescription(String) - Method in class org.youscope.plugin.microscopeaccess.MicroscopeConnectionFactoryImpl
getShutter() - Method in interface org.youscope.common.microscope.Channel: Returns the device ID of the shutter of this channel.
getShutterDevice() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns the current default shutter device.
getShutterDevice(String) - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns the shutter device with the given name.
getShutterDevice() - Method in interface org.youscope.common.microscope.Microscope: Returns the current default shutter device.
getShutterDevice(String) - Method in interface org.youscope.common.microscope.Microscope: Returns the shutter device with the given name.
getShutterDevices() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns a list of all installed shutter devices.
getShutterDevices() - Method in interface org.youscope.common.microscope.Microscope: Returns a list of all installed shutter devices.
getSingleLineDelimiter() - Method in class org.youscope.common.scripting.JavaScriptStyle
getSingleLineDelimiter() - Method in class org.youscope.common.scripting.MatlabScriptStyle
getSingleLineDelimiter() - Method in interface org.youscope.common.scripting.ScriptStyle: Returns the character sequence used in the language to start a single line comment.
getSingleLineDelimiter() - Method in class org.youscope.plugin.onix.OnixScriptStyle
getSIUnit() - Method in enum org.youscope.uielements.TimeUnit: Returns the SI name of the unit.
getSize() - Method in interface org.youscope.clientinterfaces.YouScopeFrame: Returns the size of the frame.
getSize() - Method in interface org.youscope.common.table.ColumnView: Returns the number of entries (i.e.
getSize() - Method in interface org.youscope.common.table.RowView: Returns the number of entries (i.e.
getSize() - Method in class org.youscope.common.table.TableDefinition: Returns the number of defined columns.
getSize() - Method in class org.youscope.common.table.TemporaryRow
getSize() - Method in class org.youscope.uielements.CellSelectionTable.RowHeaderListModel
getSlideZPositions() - Method in class org.youscope.plugin.zslides.ZSlidesJobConfiguration: Returns the z-positions where the jobs should be executed.
getSlimDelayMs() - Method in interface org.youscope.plugin.slimjob.SlimJob: Returns the time delay in ms between changing the SLIM reflector settings and taking an image.
getSlimDelayMS() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration: Returns the time delay in ms between changing the SLIM reflector settings and taking an image.
getSpecificity(MicroplatePositionConfiguration) - Method in interface org.youscope.addon.pathoptimizer.PathOptimizer: Returns a value in between 0 and 1 indicating how specific the given optimizer is, i.e.
getSpecificity(MicroplatePositionConfiguration) - Method in class org.youscope.plugin.fullmicroplatepath.FullMicroplateOptimizer
getSpecificity(MicroplatePositionConfiguration) - Method in class org.youscope.plugin.nonoptimizedpath.NonOptimizedOptimizer
getSpecificity(MicroplatePositionConfiguration) - Method in class org.youscope.plugin.zigzagpath.ZigZagPathOptimizer
getStageDevice() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns the current default stage device.
getStageDevice(String) - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns the stage device with the given name.
getStageDevice() - Method in interface org.youscope.common.job.basicjobs.ChangePositionJob: Returns the ID of the stage device whose position should be changed.
getStageDevice() - Method in interface org.youscope.common.microscope.Microscope: Returns the current default stage device.
getStageDevice(String) - Method in interface org.youscope.common.microscope.Microscope: Returns the stage device with the given name.
getStageDevice() - Method in class org.youscope.plugin.changepositionjob.ChangePositionJobConfiguration: Returns the stage device which should be moved, or null for the default stage.
getStageDevice() - Method in class org.youscope.plugin.microplatejob.MicroplateJobConfiguration: Returns the ID of the stage device which should be used to change between wells and positions.
getStageDevice() - Method in class org.youscope.plugin.microplatemeasurement.MicroplateMeasurementConfiguration: Returns the ID of the stage device which should be used to change between wells and positions.
getStageDevice() - Method in class org.youscope.plugin.usercontrolmeasurement.UserControlMeasurementConfiguration: Returns the stage device which should be monitored.
getStageDevices() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns all installed stage devices.
getStageDevices() - Method in interface org.youscope.common.microscope.Microscope: Returns all installed stage devices.
getStageTolerance() - Method in class org.youscope.plugin.usercontrolmeasurement.UserControlMeasurementConfiguration: Returns the tolerance for the stage monitoring (in muM).
getStartTime() - Method in interface org.youscope.common.measurement.Measurement: Returns the time when the last execution of this measurement started, or null, if it did not yet start.
getStartTime() - Method in class org.youscope.common.task.PeriodConfiguration
getState() - Method in interface org.youscope.addon.microscopeaccess.StateDeviceInternal: Returns the current state.
getState() - Method in interface org.youscope.common.measurement.Measurement: Returns the current state of the measurement.
getState() - Method in interface org.youscope.common.microscope.StateDevice: Returns the current state.
getStateAsDouble(String, double) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the value of the state with the given name.
getStateAsDouble(String, double) - Method in interface org.youscope.plugin.fluigent.FluigentScriptCallback: Returns the value of the state with the given name.
getStateAsDouble(String, double) - Method in interface org.youscope.plugin.nemesys.NemesysScriptCallback: Returns the value of the state with the given name.
getStateAsInteger(String, int) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the value of the state with the given name.
getStateAsInteger(String, int) - Method in interface org.youscope.plugin.fluigent.FluigentScriptCallback: Returns the value of the state with the given name.
getStateAsInteger(String, int) - Method in interface org.youscope.plugin.nemesys.NemesysScriptCallback: Returns the value of the state with the given name.
getStateAsString(String, String) - Method in interface org.youscope.plugin.controller.ControllerCallback: Returns the value of the state with the given name.
getStateAsString(String, String) - Method in interface org.youscope.plugin.fluigent.FluigentScriptCallback: Returns the value of the state with the given name.
getStateAsString(String, String) - Method in interface org.youscope.plugin.nemesys.NemesysScriptCallback: Returns the value of the state with the given name.
getStateDevice(String) - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns the state device with the given name.
getStateDevice(String) - Method in interface org.youscope.common.microscope.Microscope: Returns the state device with the given name.
getStateDevices() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeInternal: Returns a list of all installed state devices.
getStateDevices() - Method in interface org.youscope.common.microscope.Microscope: Returns a list of all installed state devices.
getStateLabel() - Method in interface org.youscope.addon.microscopeaccess.StateDeviceInternal: Returns the current state label.
getStateLabel(int) - Method in interface org.youscope.addon.microscopeaccess.StateDeviceInternal: Returns the label of the given state.
getStateLabel() - Method in interface org.youscope.common.microscope.StateDevice: Returns the current state label.
getStateLabel(int) - Method in interface org.youscope.common.microscope.StateDevice: Returns the label of the given state.
getStateLabels() - Method in interface org.youscope.addon.microscopeaccess.StateDeviceInternal: Returns a list of all labels of the states of this device.
getStateLabels() - Method in interface org.youscope.common.microscope.StateDevice: Returns a list of all labels of the states of this device.
getStatisticsFileName() - Method in class org.youscope.plugin.microplatemeasurement.MicroplateMeasurementConfiguration: Returns the name (without extension) of the file in which statistics of the measurement should be saved to.
getStatisticsFileName() - Method in class org.youscope.plugin.simplemeasurement.SimpleMeasurementConfiguration: Returns the name (without extension) of the file in which statistics of the measurement should be saved to.
getString(int) - Method in class org.json.JSONArray: Get the string associated with an index.
getString(String) - Method in class org.json.JSONObject: Get the string associated with a key.
getStringValue() - Method in class org.youscope.common.microscope.DeviceSetting: Returns the value of the setting as a string.
getSubImageNumber() - Method in interface org.youscope.plugin.composedimaging.ComposedImagingJob: Returns the number of sub-images.
getSupportedImageFormats() - Method in interface org.youscope.serverinterfaces.YouScopeServerProperties: Returns a list of supported image formats.
getSupportedMicroscopeConnectionIDs() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeConnectionFactory: Returns a list of all types of microscope connections the plug-in supports.
getSupportedMicroscopeConnectionIDs() - Method in class org.youscope.plugin.microscopeaccess.MicroscopeConnectionFactoryImpl
getSupportedScriptEngines() - Method in interface org.youscope.serverinterfaces.YouScopeServerProperties: Returns a list of all supported script engines of the server.
getSupportedTypeIdentifiers() - Method in interface org.youscope.addon.callback.CallbackAddonFactory: Returns a list of all callback type identifiers supported by this factory.
getSupportedTypeIdentifiers() - Method in interface org.youscope.addon.component.ComponentAddonFactory: Returns a list of all component type identifiers supported by this factory.
getSupportedTypeIdentifiers() - Method in class org.youscope.addon.component.ComponentAddonFactoryAdapter
getSupportedTypeIdentifiers() - Method in interface org.youscope.addon.measurement.MeasurementAddonFactory: Returns a list of all measurement configuration types supported by this addon
getSupportedTypeIdentifiers() - Method in class org.youscope.addon.measurement.MeasurementAddonFactoryAdapter
getSupportedTypeIdentifiers() - Method in interface org.youscope.addon.microplate.MicroplateAddonFactory: Returns the type identifiers of all microplate types supported by this addon
getSupportedTypeIdentifiers() - Method in interface org.youscope.addon.postprocessing.PostProcessorAddonFactory: Returns all measurement post-processor type identifiers supported by this addon.
getSupportedTypeIdentifiers() - Method in interface org.youscope.addon.skin.SkinFactory: Returns a list of all skin type identifiers supported by this factory.
getSupportedTypeIdentifiers() - Method in class org.youscope.addon.skin.SkinFactoryAdapter
getSupportedTypeIdentifiers() - Method in interface org.youscope.addon.tool.ToolAddonFactory: Returns all tool type identifiers supported by this addon
getSupportedTypeIdentifiers() - Method in class org.youscope.addon.tool.ToolAddonFactoryAdapter
getSupportedTypeIdentifiers() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBSMicroplateTypeFactory
getSupportedTypeIdentifiers() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTCMicroplateTypeFactory
getSupportedTypeIdentifiers() - Method in class org.youscope.plugin.cellx.OpenCellXFactory
getSupportedTypeIdentifiers() - Method in class org.youscope.plugin.customjob.CustomJobAddonFactory
getSupportedTypeIdentifiers() - Method in class org.youscope.plugin.custommicroplates.CustomMicroplateTypeFactory
getSupportedTypeIdentifiers() - Method in class org.youscope.plugin.dropletmicrofluidics.DropletMicrofluidicJobCallbackFactory
getSupportedTypeIdentifiers() - Method in class org.youscope.plugin.livemodifiablejob.LiveModifiableJobCallbackFactory
getSupportedTypeIdentifiers() - Method in class org.youscope.plugin.measurementviewer.MeasurementViewerPostProcessingFactory
getSupportedTypeIdentifiers() - Method in class org.youscope.plugin.openbis.OpenBISUploaderFactory
getSupportedTypeIdentifiers() - Method in class org.youscope.plugin.openmeasurementfolder.OpenMeasurementFolderFactory
getSupportedTypeIdentifiers() - Method in class org.youscope.plugin.scripting.RemoteScriptEngineFactory
getSupportedTypeIdentifiers() - Method in class org.youscope.plugin.usercontrolmeasurement.UserControlMeasurementCallbackFactory
getSupportedTypeIdentifiers() - Method in class org.youscope.plugin.waitforuser.WaitForUserCallbackFactory
getSupportedTypes() - Method in interface org.youscope.addon.component.generic.PropertyEditor: Get the property types supported by this editor.
getSupportedTypes() - Method in class org.youscope.addon.component.generic.PropertyEditorAdapter
getSupportedValueTypes() - Static method in class org.youscope.common.table.TableHelper: Returns all currently supported value types of YouScope.
getSyringeTableRows() - Method in class org.youscope.plugin.dropletmicrofluidics.flexiblecontroller.FlexibleControllerConfiguration: Returns a table defining when which syringe should act as an outflow or inflow syringe.
getSyringeTableRows() - Method in class org.youscope.plugin.dropletmicrofluidics.tablecontroller.TableControllerConfiguration: Returns a table defining when which syringe should act as an outflow or inflow syringe.
getSystemShutdownSettings() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeConfigurationInternal: Returns the settings which will be applied when the system shuts down.
getSystemShutdownSettings() - Method in interface org.youscope.common.microscope.MicroscopeConfiguration: Returns the settings which will be applied when the system shuts down.
getSystemStartupSettings() - Method in interface org.youscope.addon.microscopeaccess.MicroscopeConfigurationInternal: Returns the settings which will be applied when the system starts up.
getSystemStartupSettings() - Method in interface org.youscope.common.microscope.MicroscopeConfiguration: Returns the settings which will be applied when the system starts up.
getTable() - Method in class org.youscope.common.table.TableDataAdapter: Returns the last table the adapter received, or null if yet not received any table or if the adapter was cleared (see TableDataAdapter.clear()).
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.youscope.uielements.CellSelectionTable.CellSelectionRenderer
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.youscope.uielements.CellSelectionTable.ColumnHeaderRenderer
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class org.youscope.uielements.PeriodVaryingPanel.PassiveCellRenderer
getTableDefinition() - Method in class org.youscope.common.table.Table: Returns the definition (number, type and names of columns) of this table.
getTableDefinition() - Static method in class org.youscope.plugin.autofocus.AutoFocusTable: Returns the table layout for the autofocus table.
getTableDefinition() - Static method in class org.youscope.plugin.cellx.CellXTable: Returns the table layout for the quick-detect cell-detecktion algorithm.
getTableDefinition(ColumnDefinition<?>[], ColumnDefinition<?>[]) - Static method in class org.youscope.plugin.controller.ControllerTable: Returns the controller table layout, for a given set of input and output columns.
getTableDefinition() - Static method in class org.youscope.plugin.devicejob.DeviceTable: Returns the table layout for the input table for a device job.
getTableDefinition() - Static method in class org.youscope.plugin.dropletmicrofluidics.DropletMicrofluidicTable: Returns the table layout for the autofocus table.
getTableDefinition() - Static method in class org.youscope.plugin.fluigent.FluigentControlTable: Returns the layout of the Fluigent control table.
getTableDefinition() - Static method in class org.youscope.plugin.nemesys.NemesysControlTable: Returns the layout of the Nemesys control table.
getTableDefinition() - Static method in class org.youscope.plugin.onix.OnixTable: Returns the Onix table layout.
getTableDefinition() - Static method in class org.youscope.plugin.quickdetect.QuickDetectTable: Returns the table layout for the quick-detect cell-detecktion algorithm.
getTableDefinition() - Static method in class org.youscope.plugin.statistics.StatisticsTable: Returns the statistics table layout.
getTableDescription() - Method in class org.youscope.common.table.TableDefinition: Returns a description of the meaning and intended usage of the table.
getTableFilePath(String) - Method in interface org.youscope.common.saving.SaveSettings: Returns a file path (with extension) where a table with a given name should be saved.
getTableFilePath(String) - Method in class org.youscope.plugin.standardsavesettings.StandardSaveSettings
getTableName() - Method in class org.youscope.common.table.TableDefinition: Returns the name (title) of the table.
getTableSaveName() - Method in class org.youscope.plugin.fluigent.FluigentJobConfiguration: Returns the name (without extension) of the file to which the flow rate and volume information of the syringe pumps should be stored during evaluation.
getTableSaveName() - Method in class org.youscope.plugin.nemesys.NemesysJobConfiguration: Returns the name (without extension) of the file to which the flow rate and volume information of the syringe pumps should be stored during evaluation.
getTargetFlowRate() - Method in class org.youscope.plugin.dropletmicrofluidics.tablecontroller.TableControllerConfiguration: Returns the target flow rate in ul/min.
getTask(int) - Method in interface org.youscope.common.task.TaskContainerConfiguration: Returns the task at the given position.
getTask(int) - Method in class org.youscope.plugin.taskmeasurement.TaskMeasurementConfiguration
getTasks() - Method in interface org.youscope.common.measurement.Measurement: Returns a list of all tasks of this measurement.
getTasks() - Method in interface org.youscope.common.task.TaskContainerConfiguration: Returns the tasks in the container.
getTasks() - Method in class org.youscope.plugin.taskmeasurement.TaskMeasurementConfiguration
getTasks() - Method in class org.youscope.uielements.TasksDefinitionPanel: Returns configured tasks.
getText() - Method in class org.youscope.uielements.scripteditor.ScriptEditor: Returns the current text of the editor (without formatting).
getText() - Method in class org.youscope.uielements.StateButton: Returns the current text of the button.
getTileX() - Method in class org.youscope.plugin.microplatemeasurement.WellAndTileIdentifier: Returns the x-position of the tile.
getTileY() - Method in class org.youscope.plugin.microplatemeasurement.WellAndTileIdentifier: Returns the y-position of the tile.
getTimeConstantIntegral() - Method in class org.youscope.plugin.dropletmicrofluidics.evaporationController.EvaporationControllerConfiguration: Returns the time constant (in ms) of the integral part of the controller.
getTimeConstantIntegral() - Method in class org.youscope.plugin.dropletmicrofluidics.flexiblecontroller.FlexibleControllerConfiguration: Returns the time constant (in ms) of the integral part of the controller.
getTimeConstantIntegral() - Method in class org.youscope.plugin.dropletmicrofluidics.tablecontroller.TableControllerConfiguration: Returns the time constant (in ms) of the integral part of the controller.
getTimeConstantProportional() - Method in class org.youscope.plugin.dropletmicrofluidics.evaporationController.EvaporationControllerConfiguration: Returns the time constant (in ms) of the proportional part of the controller.
getTimeConstantProportional() - Method in class org.youscope.plugin.dropletmicrofluidics.flexiblecontroller.FlexibleControllerConfiguration: Returns the time constant (in ms) of the proportional part of the controller.
getTimeConstantProportional() - Method in class org.youscope.plugin.dropletmicrofluidics.tablecontroller.TableControllerConfiguration: Returns the time constant (in ms) of the proportional part of the controller.
getTimeMaxChar() - Method in class org.youscope.client.uielements.DefaultQuickLoggerModel
getTimeMaxChar() - Method in interface org.youscope.client.uielements.QuickLoggerModel: Returns the maximal number of characters the date string consists of.
getTimePerWell() - Method in class org.youscope.plugin.microplatemeasurement.MicroplateMeasurementConfiguration
getTitle() - Method in class org.youscope.addon.AddonUIAdapter: Returns the title of this UI element.
getTitle() - Method in interface org.youscope.clientinterfaces.YouScopeFrame: Returns the title of the frame.
getTolerance() - Method in class org.youscope.plugin.brentfocussearch.BrentFocusSearchConfiguration: Returns the tolerance, in um, for the focal plane position.
getToolMetadata(String) - Method in interface org.youscope.addon.tool.ToolAddonFactory: Returns the metadata (like human readable name) for the tool with the given type identifier.
getToolMetadata(String) - Method in class org.youscope.addon.tool.ToolAddonFactoryAdapter
getToolMetadata() - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns the metadata of all tools.
getToolMetadata(String) - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns the metadata of the tool having the given type identifier
getToolTip(FileNameComboBox.Type) - Static method in class org.youscope.plugin.standardsavesettings.FileNameComboBox
getToolTypeIdentifiers() - Method in interface org.youscope.clientinterfaces.ClientAddonProvider: Returns the type identifiers of all tools.
getTotalMeasuredPositions() - Method in class org.youscope.plugin.microplatemeasurement.MicroplatePositionConfiguration: Returns the total number of measured positions in a well times the number of measured wells.
getType() - Method in class org.youscope.addon.component.generic.Property: Returns the property type.
getType() - Method in interface org.youscope.addon.microscopeaccess.AvailableDeviceDriverInternal: Returns the type of this device driver.
getType() - Method in interface org.youscope.addon.microscopeaccess.DeviceInternal: Returns the type of this device.
getType() - Method in interface org.youscope.addon.microscopeaccess.PreInitDevicePropertyInternal: Returns the type of this device property.
getType() - Method in interface org.youscope.addon.microscopeaccess.PropertyInternal: Returns the type of this device property.
getType(String) - Static method in enum org.youscope.clientinterfaces.FramePositionStorageType: Returns the storage type corresponding to the identifier.
getType() - Method in interface org.youscope.common.microscope.AvailableDeviceDriver: Returns the type of this device driver.
getType() - Method in interface org.youscope.common.microscope.Device: Returns the type of this device.
getType() - Method in interface org.youscope.common.microscope.PreInitDeviceProperty: Returns the type of this device property.
getType() - Method in interface org.youscope.common.microscope.Property: Returns the type of this device property.
getType() - Method in class org.youscope.plugin.microscopeaccess.PropertyImpl
getType() - Method in class org.youscope.server.AvailableDeviceDriverRMI
getTypeIdentifier() - Method in interface org.youscope.addon.AddonMetadata: Returns the type identifier of the addon.
getTypeIdentifier() - Method in class org.youscope.addon.AddonMetadataAdapter
getTypeIdentifier() - Method in class org.youscope.addon.component.GenericComponentMetadata
getTypeIdentifier() - Method in interface org.youscope.common.callback.Callback: Returns an identifier of the type of this callback.
getTypeIdentifier() - Method in class org.youscope.common.configuration.CameraConfiguration
getTypeIdentifier() - Method in class org.youscope.common.configuration.ChannelConfiguration
getTypeIdentifier() - Method in interface org.youscope.common.configuration.Configuration: Returns a unique identifier for this configuration type.
getTypeIdentifier() - Method in class org.youscope.common.configuration.FocusConfiguration
getTypeIdentifier() - Method in interface org.youscope.common.measurement.Measurement: Returns a previously defined type identifier.
getTypeIdentifier() - Method in class org.youscope.common.measurement.microplate.MicroplateConfiguration
getTypeIdentifier() - Method in interface org.youscope.common.resource.Resource: Returns the type identifier of the resource.
getTypeIdentifier() - Method in class org.youscope.common.resource.ResourceAdapter
getTypeIdentifier() - Method in class org.youscope.common.task.RegularPeriodConfiguration
getTypeIdentifier() - Method in class org.youscope.common.task.TaskConfiguration
getTypeIdentifier() - Method in class org.youscope.common.task.VaryingPeriodConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.autofocus.AutoFocusJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.brentfocussearch.BrentFocusSearchConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.cellx.CellXConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.changepositionjob.ChangePositionJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.composedimaging.ComposedImagingJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.composedimaging.ComposedImagingMeasurementConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.composedimaging.PlateScanningJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.composedimaging.StaggeringJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.compositejob.CompositeJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.continousimaging.ContinousImagingMeasurementConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.continousimaging.ContinuousImagingJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.continousimaging.ShortContinuousImagingJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.controller.ControllerJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.customjob.CustomJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.devicejob.DeviceJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.deviceslides.DeviceSlidesJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.dropletmicrofluidics.defaultobserver.DefaultObserverConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.dropletmicrofluidics.DropletMicrofluidicJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.dropletmicrofluidics.evaporationController.EvaporationControllerConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.dropletmicrofluidics.flexiblecontroller.FlexibleControllerConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.dropletmicrofluidics.tablecontroller.TableControllerConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.exhaustivefocussearch.ExhaustiveFocusSearchConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.fluigent.FluigentJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.focusingjob.FocusingJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.glowvisualizer.GlowVisualizerConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.imagingjob.ImagingJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.labelvisualizer.LabelVisualizerConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionMeasurementConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.livemodifiablejob.LiveModifiableJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.matlabfocusscores.MatlabScoresConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.microplatejob.MicroplateJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.microplatemeasurement.MicroplateMeasurementConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.multicameracontinuousimaging.MultiCameraContinousImagingConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.multicamerajob.ParallelImagingJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.nemesys.NemesysJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.onix.OnixJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.onoffdevicejob.OnOffDeviceJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.oscillatinginput.OscillatingDeviceJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.outoffocus.OutOfFocusJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.quickdetect.QuickDetectConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.repeatjob.RepeatJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.scriptingjob.ScriptingJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.simplefocusscores.AutocorrelationFocusScoreConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.simplefocusscores.VarianceFocusScoreConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.simplemeasurement.SimpleMeasurementConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.slimjob.SlimJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.standardsavesettings.StandardSaveSettingsConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.statistics.StatisticsJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.taskmeasurement.TaskMeasurementConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.usercontrolmeasurement.UserControlMeasurementConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.waitforuser.WaitForUserJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.waitjob.ExecuteAndWaitJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.waitjob.WaitJobConfiguration
getTypeIdentifier() - Method in class org.youscope.plugin.zslides.ZSlidesJobConfiguration
getTypeIdentifier() - Method in class org.youscope.uielements.SingleComponentDefinitionPanel: Returns the type identifier of the currently active configuration, or null if no addon is available.
getTypeName() - Method in interface org.youscope.addon.AddonMetadata: Returns a short human readable name of the addon.
getTypeName() - Method in class org.youscope.addon.AddonMetadataAdapter
getTypeName() - Method in class org.youscope.addon.component.GenericComponentMetadata
getUIClassID() - Method in class org.youscope.client.uielements.QuickLogger
getUndoPresentationName() - Method in class org.youscope.uielements.scripteditor.ScriptEditor: Returns a description of the last action which can be undone, if available.
getUnitMagnifier() - Method in interface org.youscope.addon.microscopeaccess.StageDeviceInternal: Returns the magnification factor from native stage device units to micro meters: microMeters = units * unitMagnifier
getUnitMagnifier() - Method in interface org.youscope.common.microscope.StageDevice: Returns the magnification factor from native stage device units to micro meters: microMeters = units * unitMagnifier
getUnitToMs() - Method in enum org.youscope.uielements.TimeUnit: Returns the amount of milli seconds one "piece" of unit has.
getUpperAdjustmentCuttoff() - Method in class org.youscope.uielements.HistogramPlot: Returns the percentage of pixels (0 <= upperAdjustmentCuttoff < 1) which is set in the auto-adjustment to be white.
getUpperLimit() - Method in interface org.youscope.addon.microscopeaccess.FloatPropertyInternal: Returns the upper limit of this value.
getUpperLimit() - Method in interface org.youscope.addon.microscopeaccess.IntegerPropertyInternal: Returns the upper limit of this value.
getUpperLimit() - Method in interface org.youscope.common.microscope.FloatProperty: Returns the upper limit of this value.
getUpperLimit() - Method in interface org.youscope.common.microscope.IntegerProperty: Returns the upper limit of this value.
getUseSyringe() - Method in class org.youscope.plugin.dropletmicrofluidics.evaporationController.EvaporationControllerConfiguration: Returns the syringes which should be used to correct evaporation.
getUUID() - Method in interface org.youscope.common.Component: Returns a unique ID of the component.
getUUID() - Method in class org.youscope.common.job.JobAdapter
getUUID() - Method in class org.youscope.common.resource.ResourceAdapter
getValue(Configuration) - Method in class org.youscope.addon.component.generic.Property: Returns the value of the property.
getValue(Configuration, Class<T>) - Method in class org.youscope.addon.component.generic.Property: Returns the value of this property, cased to a specific class.
getValue(Class<T>) - Method in class org.youscope.addon.component.generic.PropertyEditorAdapter
getValue() - Method in class org.youscope.addon.component.generic.PropertyEditorAdapter
getValue() - Method in interface org.youscope.addon.microscopeaccess.PropertyInternal: Returns the current value of the device property as a string.
getValue() - Method in interface org.youscope.common.microscope.Property: Returns the current value of the device property as a string.
getValue(int) - Method in interface org.youscope.common.table.ColumnView: Returns the value of the entry in the given row.
getValue(int) - Method in interface org.youscope.common.table.RowView: Returns the value of the entry in the given column.
getValue(ColumnDefinition<T>) - Method in interface org.youscope.common.table.RowView: Returns the value of the table entry corresponding to the given column definition.
getValue(String) - Method in interface org.youscope.common.table.RowView: Returns the value of the entry in the column with the given column name.
getValue(int, Class<T>) - Method in interface org.youscope.common.table.RowView: Returns the value of the entry in the given column, having the given value type.
getValue(String, Class<T>) - Method in interface org.youscope.common.table.RowView: Returns the value of the entry in the column with the given column name, having the given value type.
getValue(int, int) - Method in class org.youscope.common.table.Table: Returns the table entry's value at the given row and column.
getValue(int, String) - Method in class org.youscope.common.table.Table: Returns the entry's value at the given row and column.
getValue(int, ColumnDefinition<T>) - Method in class org.youscope.common.table.Table: Returns the value of the entry at the given row corresponding to the given columnDefinition.
getValue(int, String, Class<T>) - Method in class org.youscope.common.table.Table: Returns the entry's value at the given row and column, having the given value type.
getValue(int, int, Class<T>) - Method in class org.youscope.common.table.Table: Returns the entry's value at the given row and column, having the given value type.
getValue() - Method in interface org.youscope.common.table.TableEntry: Returns the value of the entry, or null if the entry is null.
getValue(int) - Method in class org.youscope.common.table.TemporaryRow
getValue(String) - Method in class org.youscope.common.table.TemporaryRow
getValue(int, Class<T>) - Method in class org.youscope.common.table.TemporaryRow
getValue(String, Class<T>) - Method in class org.youscope.common.table.TemporaryRow
getValue(ColumnDefinition<T>) - Method in class org.youscope.common.table.TemporaryRow
getValue() - Method in class org.youscope.plugin.microscopeaccess.PropertyImpl
getValue() - Method in class org.youscope.uielements.DoubleTextField
getValue() - Method in class org.youscope.uielements.ImagePanel.PixelInfo: Gets absolute value (intensity) of the pixel.
getValue() - Method in class org.youscope.uielements.IntegerTextField
getValueAsString() - Method in interface org.youscope.common.table.TableEntry: Returns a string representation of the table entry.
getValueAt(int, int) - Method in class org.youscope.uielements.CellSelectionTable.CellSelectionTableModel
getValueType() - Method in class org.youscope.common.table.ColumnDefinition: Returns the class in which the values of this column are encoded.
getValueType() - Method in interface org.youscope.common.table.ColumnView: Returns the class in which the values of this column are encoded.
getValueType(int) - Method in interface org.youscope.common.table.RowView: Returns the class in which the values of the given column is encoded.
getValueType() - Method in interface org.youscope.common.table.TableEntry: Returns the class in which the value is encoded.
getValueType(int) - Method in class org.youscope.common.table.TemporaryRow
getVariable(String) - Static method in class org.youscope.plugin.matlabscripting.LocalMatlabProxy: Gets the value of the variable named variableName from MATLAB.
getVariable(String) - Method in interface org.youscope.plugin.matlabscripting.MatlabInternalProxy: Gets the value of the variable named variableName from MATLAB.
getVariable(String) - Method in class org.youscope.plugin.matlabscripting.RemoteMatlabProxy: Gets the value of the variable named variableName from MATLAB.
getVariable(String) - Static method in class org.youscope.plugin.matlabscripting.RemoteMatlabProxyController: Gets the value of the variable named variableName from MATLAB.
getVersion() - Method in class org.youscope.common.YouScopeVersion
getVisualizationAlgorithm() - Method in interface org.youscope.plugin.lifecelldetection.CellDetectionJob: Returns the algorithm which should be used for cell visualization, or null.
getVisualizationAlgorithmConfiguration() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionJobConfiguration: Returns the configuration of the cell visualization algorithm to use.
getVisualizationAlgorithmConfiguration() - Method in class org.youscope.plugin.lifecelldetection.CellDetectionMeasurementConfiguration: Returns the configuration of the cell visualization algorithm to use.
getWaitTime() - Method in interface org.youscope.common.job.basicjobs.WaitJob: Returns the time delay/sleeping period in ms when this job runs.
getWaitTime() - Method in class org.youscope.plugin.waitjob.ExecuteAndWaitJobConfiguration: Returns the wait time in ms.
getWaitTime() - Method in class org.youscope.plugin.waitjob.WaitJobConfiguration: Returns the wait time in ms.
getWell() - Method in class org.youscope.common.PositionInformation: Returns the well the job is executed in.
getWellHeight() - Method in interface org.youscope.common.measurement.microplate.Microplate: Returns the height of one well (distance of well centers) in mu;
getWellHeight() - Method in class org.youscope.common.measurement.microplate.MicroplateConfiguration: Returns the height of one well (distance of well centers)
getWellHeight() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS1536MicroplateType
getWellHeight() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS384MicroplateType
getWellHeight() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS96MicroplateType
getWellHeight() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC12MicroplateType
getWellHeight() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC24MicroplateType
getWellHeight() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC6MicroplateType
getWellMarginX() - Method in class org.youscope.common.measurement.microplate.MicroplateConfiguration: Returns the margin in each well between the well-border and the first measured point.
getWellMarginY() - Method in class org.youscope.common.measurement.microplate.MicroplateConfiguration: Returns the margin in each well between the well-border and the first measured point.
getWellName() - Method in class org.youscope.common.measurement.microplate.Well: Returns the common name for a well, e.g.
getWellName(int, int) - Static method in class org.youscope.common.measurement.microplate.Well: Returns the common name for a well, e.g.
getWellNumPositionsX() - Method in class org.youscope.common.measurement.microplate.MicroplateConfiguration: Returns the number of positions measured in the x-direction in each well.
getWellNumPositionsY() - Method in class org.youscope.common.measurement.microplate.MicroplateConfiguration: Returns the number of positions measured in the y-direction in each well.
getWellPositionDistanceX() - Method in class org.youscope.common.measurement.microplate.MicroplateConfiguration: Returns the distance between two adjacent positions in a well in the x-direction.
getWellPositionDistanceY() - Method in class org.youscope.common.measurement.microplate.MicroplateConfiguration: Returns the distance between two adjacent positions in a well in the y-direction.
getWellWidth() - Method in interface org.youscope.common.measurement.microplate.Microplate: Returns the width of one well (distance of well centers) in mu;
getWellWidth() - Method in class org.youscope.common.measurement.microplate.MicroplateConfiguration: Returns the width of one well (distance of well centers)
getWellWidth() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS1536MicroplateType
getWellWidth() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS384MicroplateType
getWellWidth() - Method in class org.youscope.plugin.ansisbsmicroplates.AnsiSBS96MicroplateType
getWellWidth() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC12MicroplateType
getWellWidth() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC24MicroplateType
getWellWidth() - Method in class org.youscope.plugin.bdbiosciencemicroplates.BDBioscienceMultiwellTC6MicroplateType
getWellX() - Method in class org.youscope.addon.pathoptimizer.PathOptimizerPosition: Returns the well column number.
getWellX() - Method in class org.youscope.common.measurement.microplate.Well: Returns the X-position of the well, starting at 0.
getWellX() - Method in class org.youscope.plugin.microplatemeasurement.WellAndTileIdentifier: Returns the x-position of the well.
getWellY() - Method in class org.youscope.addon.pathoptimizer.PathOptimizerPosition: Returns the well row number.
getWellY() - Method in class org.youscope.common.measurement.microplate.Well: Returns the Y-position of the well, starting at 0.
getWellY() - Method in class org.youscope.plugin.microplatemeasurement.WellAndTileIdentifier: Returns the y-position of the well.
getWidth() - Method in class org.youscope.common.image.ImageEvent: Returns image width in pixels.
getWrapper() - Static method in class org.youscope.plugin.matlabscripting.MatlabConnector: Returns the underlying wrapper.
getX() - Method in interface org.youscope.common.job.basicjobs.ChangePositionJob: Returns the x position information.
getX() - Method in class org.youscope.plugin.changepositionjob.ChangePositionJobConfiguration
getX() - Method in class org.youscope.plugin.microplatemeasurement.XYAndFocusPosition: Returns the value of the x-position in um.
getX() - Method in class org.youscope.uielements.ImagePanel.PixelInfo: Returns (zero based) x-coordinate of pixel, counted from the left.
getX1() - Method in class org.youscope.uielements.ImagePanel.LineInfo: Returns (zero based) x-coordinate of the start pixel, counted from the left.
getX2() - Method in class org.youscope.uielements.ImagePanel.LineInfo: Returns (zero based) x-coordinate of the end pixel, counted from the left.
getXPressure() - Method in interface org.youscope.plugin.onix.OnixAddon: Returns the x-pressure.
getXPressureSetpoint() - Method in interface org.youscope.plugin.onix.OnixAddon: Returns the x-pressure setpoint.
getXWellName() - Method in class org.youscope.common.measurement.microplate.Well: Returns the name of a well in the x-direction.
getXWellName(int) - Static method in class org.youscope.common.measurement.microplate.Well: Returns the name of a well in the x-direction.
getY() - Method in interface org.youscope.common.job.basicjobs.ChangePositionJob: Returns the y position information.
getY() - Method in class org.youscope.plugin.changepositionjob.ChangePositionJobConfiguration
getY() - Method in class org.youscope.plugin.microplatemeasurement.XYAndFocusPosition: Returns the value of the y-position in um.
getY() - Method in class org.youscope.uielements.ImagePanel.PixelInfo: Returns (zero based) y-coordinate of pixel, counted from the top.
getY1() - Method in class org.youscope.uielements.ImagePanel.LineInfo: Returns (zero based) y-coordinate of the start pixel, counted from the top.
getY2() - Method in class org.youscope.uielements.ImagePanel.LineInfo: Returns (zero based) y-coordinate of the end pixel, counted from the top.
getYPressure() - Method in interface org.youscope.plugin.onix.OnixAddon: Returns the y-pressure.
getYPressureSetpoint() - Method in interface org.youscope.plugin.onix.OnixAddon: Returns the y-pressure setpoint.
getYWellName() - Method in class org.youscope.common.measurement.microplate.Well: Returns the name of a well in the y-direction.
getYWellName(int) - Static method in class org.youscope.common.measurement.microplate.Well: Returns the name of a well in the y-direction.
GlassPane - Class in org.youscope.uielements: Glasspane to overlay a frame.
GlassPane(String, boolean) - Constructor for class org.youscope.uielements.GlassPane: Creates a glas pane to overlay a frame, e.g.
GlowVisualizerAddonFactory - Class in org.youscope.plugin.glowvisualizer
GlowVisualizerAddonFactory() - Constructor for class org.youscope.plugin.glowvisualizer.GlowVisualizerAddonFactory: Constructor.
GlowVisualizerConfiguration - Class in org.youscope.plugin.glowvisualizer
GlowVisualizerConfiguration() - Constructor for class org.youscope.plugin.glowvisualizer.GlowVisualizerConfiguration: Constructor.
GT - Static variable in class org.json.XML: The Character '>'.

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